ybgC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ybgC'' | ''ybgC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0725, b0736, JW0726, tol-orf1, orf1''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0725, b0736, JW0726, tol-orf1, orf1''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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esterase/thioesterase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | esterase/thioesterase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Acyl-CoA thioesterase, involved in phospholipid metabolism; binds ACP; acyl-ACP could be native substrate<ref name='LIB:EcoGene'/> | Acyl-CoA thioesterase, involved in phospholipid metabolism; binds ACP; acyl-ACP could be native substrate<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted acyl-CoA thioesterase<ref name='LIB:Riley_2006'/>, B0736<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted acyl-CoA thioesterase<ref name='LIB:Riley_2006'/>, B0736<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ybgC-tolQRA|ybgC-tolQRA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ybgC-tolQRA|ybgC-tolQRA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ybgC&loc=MG1655:773975..774379,W3110:775174..775578,DH10B:826567..826971,REL606:755634..756038 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=755634&end=756038&gene=ybgC&aa=mnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpralpksivaefkq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybgC+AND+escherichia+coli Pubmed(ybgC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ybgC Textpresso(ybgC)] | |||
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Revision as of 23:19, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ybgC |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Acyl-CoA thioesterase, involved in phospholipid metabolism; binds ACP; acyl-ACP could be native substrate[4] |
| Product Synonyms(s) | |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): ybgC-tolQRA[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YbgC-ACP interacts with PssA and PlsB. ybgC is the first gene in tolQRA operon. YbgC is a low abundance protein. A ybgC mutation has no known phenotype. YbgC contains a hotdog fold.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.