visC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''visC'' | ''visC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2901, b2906, JW2874''<ref name='LIB:Riley_2006'/> | ''ECK2901, b2906, JW2874''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted oxidoreductase, FAD/NAD(P)-binding domain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | predicted oxidoreductase, FAD/NAD(P)-binding domain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Putative FAD-dependent oxidoreductase, function unknown; downstream of and homologous to ubiH (visB)<ref name='LIB:EcoGene'/> | Putative FAD-dependent oxidoreductase, function unknown; downstream of and homologous to ubiH (visB)<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B2906<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VisC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B2906<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VisC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:visC|visC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:visC|visC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=visC&loc=MG1655:3050339..3049137,W3110:3050973..3049771,REL606:2938068..2936866,DH10B:3144209..3143007 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3144209&end=3143007&gene=visC&aa=mqsvdvaivgggmvglavacglqgsglrvavleqrvqeplaanappqlrvsainaaseklltrlgvwqdilsrrascyhgmevwdkdsfghisfddqsmgyshlghivensvihyalwnkahqssditllapaelqqvawgenetfltlkdgsmltarlvigadganswlrnkadipltfwdyqhhalvatirteephdavarqvfhgegilaflplsdphlcsivwslspeeaqrmqqasedefnralniafdnrlglckvesarqvfpltgryarqfashrlalvgdaahtihplagqgvnlgfmdaaeliaelkrlhrqgkdigqyiylrryersrkhsaalmlagmqgfrdlfsgtnpakkllrdiglkladtlpgvkpqlirqamglndlpewlr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=visC+AND+escherichia+coli Pubmed(visC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=visC Textpresso(visC)] | |||
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Revision as of 23:24, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
visC |
|---|---|
| Gene Synonym(s) |
ECK2901, b2906, JW2874[1] |
| Product Desc. |
predicted oxidoreductase, FAD/NAD(P)-binding domain[2][3] Putative FAD-dependent oxidoreductase, function unknown; downstream of and homologous to ubiH (visB)[4] |
| Product Synonyms(s) |
predicted oxidoreductase with FAD/NAD(P)-binding domain[1], B2906[2][1], VisC[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A deletion of visC has no effect on photosensitivity or aerobic respiration (Nakahigashi, 1992). visC, ubiH, ubiF and mhpA are paralogs. Probable false positive lipoprotein prediction, Cys not conserved.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.