uup:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''uup'' | ''uup'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0940, b0949, JW0932, ycbH, ycbI, tex''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0940, b0949, JW0932, ycbH, ycbI, tex''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ATP-binding protein with possible role in replication<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ATP-binding protein with possible role in replication<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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DNA-binding ATPase involved in replication; cytosolic; mutant displays an increased frequency of precise excision of transposons and defective growth of bacteriophage Mu<ref name='LIB:EcoGene'/> | DNA-binding ATPase involved in replication; cytosolic; mutant displays an increased frequency of precise excision of transposons and defective growth of bacteriophage Mu<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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fused predicted transporter subunits of ABC superfamily: ATP-binding components<ref name='LIB:Riley_2006'/>, B0949<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Uup<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tex<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | fused predicted transporter subunits of ABC superfamily: ATP-binding components<ref name='LIB:Riley_2006'/>, B0949<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Uup<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tex<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rlmL-uup|rlmL-uup]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rlmL-uup|rlmL-uup]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=uup&loc=MG1655:1009187..1011094,W3110:1010386..1012293,DH10B:1063115..1065022,REL606:1027055..1028962 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1027055&end=1028962&gene=uup&aa=mslismhgawlsfsdaplldnaelhiednervclvgrngagkstlmkilnreqglddgriiyeqdlivarlqqdpprnvegsvydfvaegieeqaeylkryhdisrlvmndpseknlnelakvqeqldhhnlwqlenrinevlaqlgldpnvalsslsggwlrkaalgralvsnprvllldeptnhldietidwlegflktfngtiifishdrsfirnmatrivdldrgklvtypgnydqyllekeealrveelqnaefdrklaqeevwirqgikarrtrnegrvralkamrrergerrevmgtakmqveeasrsgkivfemedvcyqvngkqlvkdfsaqvlrgdkialigpngcgkttllklmlgqlqadsgrihvgtklevayfdqhraeldpdktvmdnlaegkqevmvngkprhvlgylqdflfhpkramtpvralsggernrlllarlflkpsnllildeptndldvetlelleelidsyqgtvllvshdrqfvdntvtecwifegggkigryvggyhdargqqeqyvalkqpavkkteeaaaakaetvkrsssklsyklqreleqlpqlledleaklealqtqvadasffsqpheqtqkvladmaaaeqeleqaferweylealkngg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uup+AND+escherichia+coli Pubmed(uup)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=uup Textpresso(uup)] | |||
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Revision as of 23:25, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
uup |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
ATP-binding protein with possible role in replication[2][3] DNA-binding ATPase involved in replication; cytosolic; mutant displays an increased frequency of precise excision of transposons and defective growth of bacteriophage Mu[4] |
| Product Synonyms(s) |
fused predicted transporter subunits of ABC superfamily: ATP-binding components[1], B0949[2][1], YcbH[2][1], YcbI[2][1], Uup[2][1], Tex[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Has two ABC ATPase domains; ATPase activity is essential for function. A C-terminal domain of the protein displays predicted structural homology with the Little Finger domain of Y family DNA polymerases and is involved in DNA binding.[4]
Similar to yeast proteins involved in ribosomal function and assembly.
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.