ung:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ung'' | ''ung'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2578, b2580, JW2564''<ref name='LIB:Riley_2006'/> | ''ECK2578, b2580, JW2564''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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uracil-DNA-glycosylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | uracil-DNA-glycosylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Uracil-DNA glycosylase; UDG excises uracil from DNA by base flipping mechanism; prefers ssDNA over dsDNA<ref name='LIB:EcoGene'/> | Uracil-DNA glycosylase; UDG excises uracil from DNA by base flipping mechanism; prefers ssDNA over dsDNA<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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uracil-DNA-glycosylase<ref name='LIB:Riley_2006'/>, B2580<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ung<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | uracil-DNA-glycosylase<ref name='LIB:Riley_2006'/>, B2580<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ung<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ung|ung]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ung|ung]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ung&loc=MG1655:2714776..2715465,W3110:2715410..2716099,REL606:2638247..2638936,DH10B:2806541..2807230 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2806541&end=2807230&gene=ung&aa=maneltwhdvlaeekqqpyflntlqtvaserqsgvtiyppqkdvfnafrftelgdvkvvilgqdpyhgpgqahglafsvrpgiaippsllnmykelentipgftrpnhgyleswarqgvlllntvltvragqahshaslgwetftdkvislinqhregvvfllwgshaqkkgaiidkqrhhvlkaphpsplsahrgffgcnhfvlanqwleqrgetpidwmpvlpaese Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ung+AND+escherichia+coli Pubmed(ung)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ung Textpresso(ung)] | |||
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Revision as of 23:25, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ung |
|---|---|
| Gene Synonym(s) |
ECK2578, b2580, JW2564[1] |
| Product Desc. |
Uracil-DNA glycosylase; UDG excises uracil from DNA by base flipping mechanism; prefers ssDNA over dsDNA[4] |
| Product Synonyms(s) | |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
UDG and Ndk form a complex (Goswami, 2006). UDG binds SSB C-terminus. CpxRA negatively regulates ung.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.