tmk:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''tmk''  
''tmk''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1084, b1098, JW1084, ycfG, G157''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK1084, b1098, JW1084, ycfG, G157''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Thymidylate kinase<ref name='LIB:EcoGene'/>
Thymidylate kinase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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thymidylate kinase<ref name='LIB:Riley_2006'/>, B1098<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tmk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
thymidylate kinase<ref name='LIB:Riley_2006'/>, B1098<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tmk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0015949 nucleobase, nucleoside and nucleotide interconversion ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0006233 dTDP biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0006235 dTTP biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0004798 thymidylate kinase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:pabC|pabC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:pabC|pabC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=tmk&loc=MG1655:1154347..1154988,W3110:1156701..1157342,DH10B:1209792..1210433,REL606:1169693..1170334 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1169693&end=1170334&gene=tmk&aa=mrskyivieglegagkttarnvvvetleqlgirdmvftrepggtqlaeklrslvldiksvgdevitdkaevlmfyaarvqlvetvikpalangtwvigdrhdlstqayqgggrgidqhmlatlrdavlgdfrpdltlyldvtpevglkrarargeldrieqesfdffnrtrarylelaaqdksihtidatqpleavmdairttvthwvkelda Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tmk+AND+escherichia+coli Pubmed(tmk)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tmk Textpresso(tmk)]


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Revision as of 23:28, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

tmk

Gene Synonym(s)

ECK1084, b1098, JW1084, ycfG, G157[1][2]

Product Desc.

Thymidylate kinase[3]

Product Synonyms(s)

thymidylate kinase[1], B1098[2][1], YcfG[2][1], Tmk[2][1]

Function from GO

Biological Process

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pabC[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(tmk)    Textpresso(tmk)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Essential gene.[3]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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