tbpA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''tbpA'' | ''tbpA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0069, b0068, JW0067, sfuA, thiB, yabL''<ref name='LIB:Riley_2006'/> | ''ECK0069, b0068, JW0067, sfuA, thiB, yabL''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Periplasmic thiamin binding protein; monomeric<ref name='LIB:EcoGene'/> | Periplasmic thiamin binding protein; monomeric<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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thiamin transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0068<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TbpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | thiamin transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0068<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TbpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:thiQ|thiQ]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:thiQ|thiQ]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=tbpA&loc=MG1655:75480..74497,W3110:75480..74497 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=75480&end=74497&gene=tbpA&aa=mlkkclpllllctapvfakpvltvytydsfaadwgpgpvvkkafeadcncelklvaledgvsllnrlrmegknskadvvlgldnnlldaasktglfaksgvaadavnvpggwnndtfvpfdygyfafvydknklknppqslkelvesdqnwrviyqdprtstpglglllwmqkvygddapqawqklakktvtvtkgwseayglflkgesdlvlsyttspayhileekkdnyaaanfseghylqvevaartaaskqpelaqkflqfmvspafqnaiptgnwmypvanvtlpagfekltkpattleftpaevaaqrqawisewqravsr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tbpA+AND+escherichia+coli Pubmed(tbpA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tbpA Textpresso(tbpA)] | |||
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Revision as of 23:29, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tbpA |
|---|---|
| Gene Synonym(s) |
ECK0069, b0068, JW0067, sfuA, thiB, yabL[1] |
| Product Desc. |
Component of thiamin ABC transporter[2][3] Periplasmic thiamin binding protein; monomeric[4] |
| Product Synonyms(s) |
thiamin transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B0068[2][1], YabL[2][1], SfuA[2][1], ThiB[2][1], TbpA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
tbpA-thiPQ operon expression is controlled by a thiamine pyrophosphate (TPP) responsive riboswitch in the 5' UTR. This THI element has been reported in intergenic sRNA searches as sroA/tpe79. The tbpA riboswitch is the target for the antibiotic pyrithiamine. The corrected U00096.2 sequence revises the sequence of the TbpA signal peptide, previous thought to be 14 aa.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.