surE:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''surE'' | ''surE'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2739, b2744, JW2714, ygbC''<ref name='LIB:Riley_2006'/> | ''ECK2739, b2744, JW2714, ygbC''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Nucleotidase, 5- or 3'-monophosphates; purine, pyrimidine, ribo- and deoxyribonucleotides all effectively hydrolyzed; short chain exopolyphosphatase<ref name='LIB:EcoGene'/> | Nucleotidase, 5- or 3'-monophosphates; purine, pyrimidine, ribo- and deoxyribonucleotides all effectively hydrolyzed; short chain exopolyphosphatase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:Riley_2006'/>, B2744<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SurE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:Riley_2006'/>, B2744<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SurE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:surE-pcm|surE-pcm]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:surE-pcm|surE-pcm]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=surE&loc=MG1655:2868296..2867535,W3110:2868930..2868169,DH10B:2960838..2960077,REL606:2765135..2764374 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2765135&end=2764374&gene=surE&aa=mrillsnddgvhapgiqtlakalrefadvqvvapdrnrsgasnsltlesslrtftfengdiavqmgtptdcvylgvnalmrprpdivvsginagpnlgddviysgtvaaamegrhlgfpalavsldghkhydtaaavtcsilralckeplrtgrilninvpdlpldqikgirvtrcgtrhpadqvipqqdprgntlywigppggkcdagpgtdfaavdegyvsitplhvdltahsaqdvvsdwlnsvgvgtqw Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=surE+AND+escherichia+coli Pubmed(surE)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=surE Textpresso(surE)] | |||
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Revision as of 23:29, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
surE |
|---|---|
| Gene Synonym(s) |
ECK2739, b2744, JW2714, ygbC[1] |
| Product Desc. |
broad specificity 5'(3')-nucleotidase and polyphosphatase[2][3] Nucleotidase, 5- or 3'-monophosphates; purine, pyrimidine, ribo- and deoxyribonucleotides all effectively hydrolyzed; short chain exopolyphosphatase[4] |
| Product Synonyms(s) |
broad specificity 5'(3')-nucleotidase and polyphosphatase[1], B2744[2][1], YgbC[2][1], SurE[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A surE mutation is a specific suppressor of pcm stationary phase survival defects. The original surE mutant had a secondary rpoS mutation. The lack of survival in stationary phase was due to this cryptic rpoS mutation and clean surE mutants have no survival phenotype. SurE demonstrates nucleotidase preference for short chain substrates. otherPDB (T. maritima): 1J9J, 1J9K, 1J9L, 1ILV.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.