sucD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''sucD'' | ''sucD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0717, b0729, JW0718''<ref name='LIB:Riley_2006'/> | ''ECK0717, b0729, JW0718''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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succinyl-CoA synthetase, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | succinyl-CoA synthetase, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Succinyl CoA synthase alpha-subunit<ref name='LIB:EcoGene'/> | Succinyl CoA synthase alpha-subunit<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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succinyl-CoA synthetase, NAD(P)-binding, alpha subunit<ref name='LIB:Riley_2006'/>, B0729<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SucD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | succinyl-CoA synthetase, NAD(P)-binding, alpha subunit<ref name='LIB:Riley_2006'/>, B0729<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SucD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB, [[:Category:Txn_unit:sucABCD|sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00143, suc | transcription unit(s): [[:Category:Txn_unit:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB, [[:Category:Txn_unit:sucABCD|sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00143, suc | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=sucD&loc=MG1655:763403..764272,W3110:764602..765471,DH10B:815995..816864,REL606:745062..745931 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=745062&end=745931&gene=sucD&aa=msilidkntkvicqgftgsqgtfhseqaiaygtkmvggvtpgkggtthlglpvfntvreavaatgatasviyvpapfckdsileaidagikliititegiptldmltvkvkldeagvrmigpncpgvitpgeckigiqpghihkpgkvgivsrsgtltyeavkqttdygfgqstcvgiggdpipgsnfidilemfekdpqteaivmigeiggsaeeeaaayikehvtkpvvgyiagvtapkgkrmghagaiiaggkgtadekfaaleaagvktvrsladigealktvlk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sucD+AND+escherichia+coli Pubmed(sucD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sucD Textpresso(sucD)] | |||
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Revision as of 23:30, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
sucD |
|---|---|
| Gene Synonym(s) |
ECK0717, b0729, JW0718[1] |
| Product Desc. |
succinyl-CoA synthetase, α subunit[2][3]; Component of succinyl-CoA synthetase[2][3] Succinyl CoA synthase alpha-subunit[4] |
| Product Synonyms(s) |
succinyl-CoA synthetase, NAD(P)-binding, alpha subunit[1], B0729[2][1], SucD[2][1], α subunit[2][1] |
| Function from GO |
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): sdhCDAB-sucABCD[2], OP00142, sdhCDAB, sucABCD[2], OP00143, suc |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
sucCD is a synthetic lethal with sucAB. SucD is down 5X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). Binds TrxA (Kumar, 2004). HT_Cmplx6_Cyt: SucC+SucD.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.