queD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''queD'' | ''queD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ygcM, ECK2760, b2765, JW2735, ptpS''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ''ygcM, ECK2760, b2765, JW2735, ptpS'', sscR<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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6-pyruvoyl tetrahydropterin synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | 6-pyruvoyl tetrahydropterin synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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6-pyruvoyl tetrahydrobiopterin synthase (PTPS); also has novel sepiapterin side chain releasing (SSCR) activity, producing 7,8-dihydropterin; may be involved in queuosine biosynthesis<ref name='LIB:EcoGene'/> | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS); also has novel sepiapterin side chain releasing (SSCR) activity, producing 7,8-dihydropterin; may be involved in queuosine biosynthesis<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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6-pyruvoyl tetrahydrobiopterin synthase (PTPS)<ref name='LIB:Riley_2006'/>, B2765<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SscR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PtpS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS)<ref name='LIB:Riley_2006'/>, B2765<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SscR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PtpS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ygcM|ygcM]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ygcM|ygcM]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=sscR&loc=MG1655:2890236..2890601,W3110:2890870..2891235,DH10B:2982778..2983143 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2982778&end=2983143&gene=sscR&aa=mmsttlfkdftfeaahrlphvpeghkcgrlhghsfmvrleitgevdphtgwiidfaelkaafkptyerldhhylndipglenptsevlakwiwdqvkpvvpllsavmvketctagciyrge Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sscR+AND+escherichia+coli Pubmed(sscR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sscR Textpresso(sscR)] | |||
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Revision as of 23:30, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
queD |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
6-pyruvoyl tetrahydropterin synthase[3][2] 6-pyruvoyl tetrahydrobiopterin synthase (PTPS); also has novel sepiapterin side chain releasing (SSCR) activity, producing 7,8-dihydropterin; may be involved in queuosine biosynthesis[4] |
| Product Synonyms(s) |
6-pyruvoyl tetrahydrobiopterin synthase (PTPS)[1], B2765[3][1], SscR[3][1], YgcM[3][1], PtpS[3][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The B. subtilis sscR(queD) ortholog is involved in queuosine preQ0 synthesis (Reader, 2004).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.