ssb:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ssb'' | ''ssb'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4051, b4059, JW4020, exrB, lexC''<ref name='LIB:Riley_2006'/> | ''ECK4051, b4059, JW4020, exrB, lexC''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ssDNA-binding protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ssDNA-binding protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Single-stranded DNA-binding protein; alkali-inducible; homotetramer<ref name='LIB:EcoGene'/> | Single-stranded DNA-binding protein; alkali-inducible; homotetramer<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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Single-stranded DNA-binding protein<ref name='LIB:Riley_2006'/>, B4059<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LexC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ssb<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | Single-stranded DNA-binding protein<ref name='LIB:Riley_2006'/>, B4059<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LexC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ssb<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ssb|ssb]]<ref name='LIB:EcoCyc10.6'/>, OP00091 | transcription unit(s): [[:Category:Txn_unit:ssb|ssb]]<ref name='LIB:EcoCyc10.6'/>, OP00091 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ssb&loc=MG1655:4272148..4272684,W3110:4277715..4278251,REL606:4253058..4253594,DH10B:4371844..4372380 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4371844&end=4372380&gene=ssb&aa=masrgvnkvilvgnlgqdpevrympnggavanitlatseswrdkatgemkeqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqmlggrqgggapaggnigggqpqggwgqpqqpqggnqfsggaqsrpqqsapaapsneppmdfdddipf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ssb+AND+escherichia+coli Pubmed(ssb)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ssb Textpresso(ssb)] | |||
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Revision as of 23:30, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ssb |
|---|---|
| Gene Synonym(s) |
ECK4051, b4059, JW4020, exrB, lexC[1] |
| Product Desc. |
Single-stranded DNA-binding protein; alkali-inducible; homotetramer[4] |
| Product Synonyms(s) |
Single-stranded DNA-binding protein[1], B4059[2][1], LexC[2][1], ExrB[2][1], Ssb[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
SSB binds to RecQ and stimulates DNA unwinding (Shereda, 2007). Secondary structure of DNA does not effect binding of SSB. SSB increases the binding of RecA in DNA with secondary structure. LexA regulon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.