tusA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''sirA'' | ''sirA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yhhP, ECK3454, b3470, JW3435, tusA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ''yhhP, ECK3454, b3470, JW3435, tusA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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sulfur transfer protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | sulfur transfer protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis; motility defect; affects RpoS stability; may bind RNA; mutants form filaments dues to disruption of ftsZ ring; suppressed by multicopy ftsZ or dksA; required for cell growth<ref name='LIB:EcoGene'/> | 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis; motility defect; affects RpoS stability; may bind RNA; mutants form filaments dues to disruption of ftsZ ring; suppressed by multicopy ftsZ or dksA; required for cell growth<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved protein required for cell growth<ref name='LIB:Riley_2006'/>, B3470<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TusA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | conserved protein required for cell growth<ref name='LIB:Riley_2006'/>, B3470<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TusA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:tusA|tusA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:tusA|tusA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=sirA&loc=MG1655:3607019..3606774,W3110:4031419..4031664,REL606:3539684..3539439,DH10B:3704764..3704519 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3704764&end=3704519&gene=sirA&aa=mtdlfsspdhtldalglrcpepvmmvrktvrnmqpgetlliiaddpattrdipgfctfmehelvaketdglpyrylirkgg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sirA+AND+escherichia+coli Pubmed(sirA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sirA Textpresso(sirA)] | |||
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Revision as of 23:31, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
sirA |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis; motility defect; affects RpoS stability; may bind RNA; mutants form filaments dues to disruption of ftsZ ring; suppressed by multicopy ftsZ or dksA; required for cell growth[4] |
| Product Synonyms(s) |
conserved protein required for cell growth[1], B3470[3][1], YhhP[3][1], SirA[3][1], TusA[3][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
SirA(TusA) interacts with and activates IscS, accepting sulfur from IscS to form C19 persulfide; transfers C19 persulfide to C78 of YheN(TusD). The gene name tus has already been used as a primary gene name, so tusA-E are kept as synonyms in EcoGene.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.