rsuA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rsuA''  
''rsuA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2177, b2183, JW2171, yejD''<ref name='LIB:Riley_2006'/>
''ECK2177, b2183, JW2171, yejD''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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16S rRNA pseudouridine synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
16S rRNA pseudouridine synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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16S RNA U516 pseudouridine synthase<ref name='LIB:EcoGene'/>
16S RNA U516 pseudouridine synthase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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16S rRNA pseudouridylate 516 synthase<ref name='LIB:Riley_2006'/>, B2183<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
16S rRNA pseudouridylate 516 synthase<ref name='LIB:Riley_2006'/>, B2183<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0000455 enzyme-directed rRNA pseudouridine synthesis ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0031118 rRNA pseudouridine synthesis ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0009982 pseudouridine synthase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rsuA|rsuA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rsuA|rsuA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rsuA&loc=MG1655:2278505..2277810,W3110:2283817..2283122,DH10B:2369493..2368798,REL606:2231671..2230976 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2231671&end=2230976&gene=rsuA&aa=mrldkfiaqqlgvsraiagreirgnrvtvdgeivrnaafkllpehdvaydgnplaqqhgpryfmlnkpqgyvcstddpdhptvlyfldepvawklhaagrldidttglvlmtddgqwshritsprhhcektylvtlespvaddtaeqfakgvqlhnekdltkpavlevitptqvrltisegryhqvkrmfaavgnhvvelhreriggitldadlapgeyrplteeeiasvv Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsuA+AND+escherichia+coli Pubmed(rsuA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rsuA Textpresso(rsuA)]


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Revision as of 23:34, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rsuA

Gene Synonym(s)

ECK2177, b2183, JW2171, yejD[1]

Product Desc.

16S rRNA pseudouridine synthase[2][3]

16S RNA U516 pseudouridine synthase[4]

Product Synonyms(s)

16S rRNA pseudouridylate 516 synthase[1], B2183[2][1], YejD[2][1], RsuA[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rsuA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rsuA)    Textpresso(rsuA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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