rlmA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rlmA'' | ''rlmA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1820, b1822, JW1811, yebH, RlmAI''<ref name='LIB:Riley_2006'/> | ''ECK1820, b1822, JW1811, yebH, RlmAI'', rrmA<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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EG12207<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | EG12207<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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23S rRNA m1G745 methyltransferase, SAM-dependent; mutant has slow growth rate, slow chain elongation rate, and viomycin resistance<ref name='LIB:EcoGene'/> | 23S rRNA m1G745 methyltransferase, SAM-dependent; mutant has slow growth rate, slow chain elongation rate, and viomycin resistance<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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23S rRNA m1G745 methyltransferase<ref name='LIB:Riley_2006'/>, B1822<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YebH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RrmA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmAI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 23S rRNA m1G745 methyltransferase<ref name='LIB:Riley_2006'/>, B1822<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YebH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RrmA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmAI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Biological Process''' | |||
* GO:0031167 rRNA methylation ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rlmA|rlmA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rlmA|rlmA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rrmA&loc=MG1655:1905084..1904275,W3110:1908774..1907965,DH10B:1995655..1994846,REL606:1884830..1885639 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1884830&end=1885639&gene=rrmA&aa=msfscplchqplsreknsyicpqrhqfdmakegyvnllpvqhkrsrdpgdsaemmqarrafldaghyqplrdaivaqlrerlddkatavldigcgegyythafadalpeittfgldvskvaikaaakrypqvtfcvasshrlpfsdtsmdaiiriyapckaeelarvvkpggwvitatpgprhlmelkgliynevhlhaphaeqlegftlqqsaelcypmrlrgdeavallqmtpfawrakpevwqtlaakevfdcqtdfnihlwqrsy Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rrmA+AND+escherichia+coli Pubmed(rrmA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rrmA Textpresso(rrmA)] | |||
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Revision as of 23:34, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rlmA |
|---|---|
| Gene Synonym(s) |
ECK1820, b1822, JW1811, yebH, RlmAI, rrmA[1] |
| Product Desc. |
23S rRNA m1G745 methyltransferase, SAM-dependent; mutant has slow growth rate, slow chain elongation rate, and viomycin resistance[4] |
| Product Synonyms(s) |
23S rRNA m1G745 methyltransferase[1], B1822[2][1], YebH[2][1], RrmA[2][1], RlmAI[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.