rlmB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rlmB'' | ''rlmB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4176, b4180, JW4138, yjfH''<ref name='LIB:Riley_2006'/> | ''ECK4176, b4180, JW4138, yjfH''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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23S rRNA methyltransferase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 23S rRNA methyltransferase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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23S rRNA mG2251 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | 23S rRNA mG2251 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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23S rRNA (Gm2251)-methyltransferase product<ref name='LIB:Riley_2006'/>, RlmB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjfH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4180 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 23S rRNA (Gm2251)-methyltransferase product<ref name='LIB:Riley_2006'/>, RlmB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjfH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4180 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0000453 enzyme-directed rRNA 2'-O-methylation ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Molecular Function''' | |||
* GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:nsrR-rnr-rlmB|nsrR-rnr-rlmB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:nsrR-rnr-rlmB|nsrR-rnr-rlmB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rlmB&loc=MG1655:4407298..4408029,W3110:4413955..4414686,DH10B:4507660..4508391 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4507660&end=4508391&gene=rlmB&aa=msemiygihavqalleraperfqevfilkgredkrllplihalesqgvviqlanrqyldeksdgavhqgiiarvkpgrqyqendlpdliasldqpfllildgvtdphnlgaclrsadaagvhavivpkdrsaqlnatakkvacgaaesvplirvtnlartmrmlqeeniwivgtageadhtlyqskmtgrlalvmgaegegmrrltrehcdelisipmagsvsslnvsvatgiclfeavrqrs Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rlmB+AND+escherichia+coli Pubmed(rlmB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rlmB Textpresso(rlmB)] | |||
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Revision as of 00:31, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rlmB |
|---|---|
| Gene Synonym(s) |
ECK4176, b4180, JW4138, yjfH[1] |
| Product Desc. |
23S rRNA methyltransferase monomer[2][3]; Component of 23S rRNA methyltransferase[3] 23S rRNA mG2251 methyltransferase, SAM-dependent[4] |
| Product Synonyms(s) |
23S rRNA (Gm2251)-methyltransferase product[1], RlmB product[2][1], YjfH product[2][1], B4180 product[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): nsrR-rnr-rlmB[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
rlmB is non-essential.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.