ribE:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ribE'' | ''ribE'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0409, b0415, JW0405, ribH, ybaF, nusIII''<ref name='LIB:Riley_2006'/> | ''ECK0409, b0415, JW0405, ribH, ybaF, nusIII''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Lumazine (6,7-dimethyl-8-ribityllumazine) synthase; 60-mer capsid; penultimate step in the biosynthesis of riboflavin; binds RibC homotrimer<ref name='LIB:EcoGene'/> | Lumazine (6,7-dimethyl-8-ribityllumazine) synthase; 60-mer capsid; penultimate step in the biosynthesis of riboflavin; binds RibC homotrimer<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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riboflavin synthase beta chain<ref name='LIB:Riley_2006'/>, B0415<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | riboflavin synthase beta chain<ref name='LIB:Riley_2006'/>, B0415<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ybaD|ybaD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ybaD|ybaD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ribE&loc=MG1655:433871..434341,W3110:433871..434341,DH10B:373202..373672 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=373202&end=373672&gene=ribE&aa=mniieanvatpdarvaitiarfnnfindsllegaidalkrigqvkdenitvvwvpgayelplaagalaktgkydavialgtvirggtahfeyvaggasnglahvaqdseipvafgvlttesieqaieragtkagnkgaeaaltaleminvlkaika Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ribE+AND+escherichia+coli Pubmed(ribE)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ribE Textpresso(ribE)] | |||
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Revision as of 00:24, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ribE |
|---|---|
| Gene Synonym(s) |
ECK0409, b0415, JW0405, ribH, ybaF, nusIII[1] |
| Product Desc. |
Component of lumazine synthase[2]; 6,7-dimethyl-8-ribityllumazine synthase[3] Lumazine (6,7-dimethyl-8-ribityllumazine) synthase; 60-mer capsid; penultimate step in the biosynthesis of riboflavin; binds RibC homotrimer[4] |
| Product Synonyms(s) |
riboflavin synthase beta chain[1], B0415[2][1], RibE[2][1], YbaF[2][1], RibH[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.