rhaA:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''rhaA'' | ''rhaA'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK3896, b3903, JW5561''<ref name='LIB:Riley_2006'/> | ''ECK3896, b3903, JW5561''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
L-Rhamnose isomerase<ref name='LIB:EcoGene'/> | L-Rhamnose isomerase<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
L-rhamnose isomerase<ref name='LIB:Riley_2006'/>, B3903<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-rhamnose ketol-isomerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | L-rhamnose isomerase<ref name='LIB:Riley_2006'/>, B3903<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-rhamnose ketol-isomerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Molecular Function''' | |||
* GO:0008740 L-rhamnose isomerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0019301 rhamnose catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0019324 L-lyxose metabolic process ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:rhaBAD|rhaBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00309 | transcription unit(s): [[:Category:Txn_unit:rhaBAD|rhaBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00309 | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=rhaA&loc=MG1655:4094005..4092746,W3110:3540699..3541958,REL606:4075470..4074205,DH10B:4193702..4192443 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4193702&end=4192443&gene=rhaA&aa=mttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpegsltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleaagdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrrg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhaA+AND+escherichia+coli Pubmed(rhaA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rhaA Textpresso(rhaA)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:23, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rhaA |
|---|---|
| Gene Synonym(s) |
ECK3896, b3903, JW5561[1] |
| Product Desc. |
L-Rhamnose isomerase[2] |
| Product Synonyms(s) |
L-rhamnose isomerase[1], B3903[3][1], RhaA[3][1], L-rhamnose ketol-isomerase[3][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
RhaA also has L- lyxose isomerase activity and is needed for growth on L-lyxose (Badia, 1991).[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7