rdoA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rdoA'' | ''rdoA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yihE, ECK3851, b3859, JW3831, orfA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''yihE, ECK3851, b3859, JW3831, orfA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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cytoplasmic protein of low abundance<ref name='LIB:EcoCyc10.6'/>; serine/threonine protein kinase<ref name='LIB:EcoCyc11.1'/> | cytoplasmic protein of low abundance<ref name='LIB:EcoCyc10.6'/>; serine/threonine protein kinase<ref name='LIB:EcoCyc11.1'/> | ||
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Thr/Ser kinase implicated in Cpx stress response<ref name='LIB:EcoGene'/> | Thr/Ser kinase implicated in Cpx stress response<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted kinase<ref name='LIB:Riley_2006'/>, B3859<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OrfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RdoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted kinase<ref name='LIB:Riley_2006'/>, B3859<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OrfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RdoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0004674 protein serine/threonine kinase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rdoA-dsbA|rdoA-dsbA]]<ref name='LIB:EcoCyc10.6'/>, yihE-dsbA | transcription unit(s): [[:Category:Txn_unit:rdoA-dsbA|rdoA-dsbA]]<ref name='LIB:EcoCyc10.6'/>, yihE-dsbA | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rdoA&loc=MG1655:4040438..4041424,W3110:3594266..3593280,REL606:4020712..4021698 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4020712&end=4021698&gene=rdoA&aa=mnnsaftfqtlhpdtimdalfehgirvdsgltplnsyenrvyqfqdedrrrfvvkfyrperwtadqileehqfalqlvndevpvaapvafngqtllnhqgfyfavfpsvggrqfeadnidqmeavgrylgrmhqtgrkqlfihrptiglneylieprklfedatlipsglkaaflkatdeliaavtahwredftvlrlhgdchagnilwrdgpmfvdlddarngpavqdlwmllngdkaeqrmqletiieayeefsefdtaeiglieplramrlvyylawlmrrwadpafpknfpwltgedywlrqtatfieqakvlqepplqltpmy Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rdoA+AND+escherichia+coli Pubmed(rdoA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rdoA Textpresso(rdoA)] | |||
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Revision as of 23:13, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rdoA |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
cytoplasmic protein of low abundance[2]; serine/threonine protein kinase[3] Thr/Ser kinase implicated in Cpx stress response[4] |
| Product Synonyms(s) |
predicted kinase[1], B3859[2][1], OrfA[2][1], RdoA[2][1], YihE[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
rdoA is required for long-term cell survival and for the expression of surface appendages (Zheng, 2007). The RdoA protein kinase may be involved in the regulation of the extracytoplasmic stress response in E. coli (Zheng, 2007). RdoA was identified as a weakly expressed 39 kDa cytoplasmic protein in E. coli (Belin, 1994). The rdoA gene is involved in viulence of Shigella flexerneri via its regulatory role of the gal operon during LPS synthesis; mutations in rdoA result in altered LPS structure (Edwards-Jones, 2004). RdoA is involved in relaying cpx-induced signals in Salmonella (Suntharalingam, 2003). rdoA is in an operon with dsbA in E. coli, but not directly involved in disulfide bond formation (Belin, 1994). A transcript array in Shigella shows major changes in a rdoA deletion strain (li, 2001). Cpx regulon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.