rcsF:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rcsF'' | ''rcsF'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0196, b0196, JW0192''<ref name='LIB:Riley_2006'/> | ''ECK0196, b0196, JW0192''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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RcsF--phosphorelay glucose and zinc sensor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | RcsF--phosphorelay glucose and zinc sensor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Lipoprotein that signals increased capsule synthesis; upstream of RcsCDB phoshorelay; overexpression confers mucoid phenotype and increases colanic acid capsule synthesis; restores colony formation of ftsZ84 mutants on low salt<ref name='LIB:EcoGene'/> | Lipoprotein that signals increased capsule synthesis; upstream of RcsCDB phoshorelay; overexpression confers mucoid phenotype and increases colanic acid capsule synthesis; restores colony formation of ftsZ84 mutants on low salt<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted outer membrane protein, signal<ref name='LIB:Riley_2006'/>, B0196<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted outer membrane protein, signal<ref name='LIB:Riley_2006'/>, B0196<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yaeB|yaeB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yaeB|yaeB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rcsF&loc=MG1655:219995..219591,W3110:219995..219591,DH10B:194099..193695,REL606:222835..222431 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=222835&end=222431&gene=rcsF&aa=mralpiclvalmlsgcsmlsrspvepvqstapqpkaepakpkapratpvriytnaeelvgkpfrdlgevsgdscqasnqdsppsiptarkrmqinaskmkanavllhscevtsgtpgcyrqavcigsalnitak Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcsF+AND+escherichia+coli Pubmed(rcsF)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rcsF Textpresso(rcsF)] | |||
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Revision as of 23:13, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rcsF |
|---|---|
| Gene Synonym(s) |
ECK0196, b0196, JW0192[1] |
| Product Desc. |
RcsF--phosphorelay glucose and zinc sensor[2][3] Lipoprotein that signals increased capsule synthesis; upstream of RcsCDB phoshorelay; overexpression confers mucoid phenotype and increases colanic acid capsule synthesis; restores colony formation of ftsZ84 mutants on low salt[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Increased synthesis of RcsF is not needed for RcsC activation, implying that RcsF undergoes modification or conformational change in response to cell surface conditions that signal increased colanic acid synthesis. First 15 aa are a type II signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.