rcnR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rcnR'' | ''rcnR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yohL, ECK2098, b2105, JW2092''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''yohL, ECK2098, b2105, JW2092''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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DNA-binding transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; RcnR transcriptional repressor<ref name='LIB:EcoCyc11.1'/> | DNA-binding transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; RcnR transcriptional repressor<ref name='LIB:EcoCyc11.1'/> | ||
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Transcriptional repressor of rcnA; nickel- and cobalt-responsive<ref name='LIB:EcoGene'/> | Transcriptional repressor of rcnA; nickel- and cobalt-responsive<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved protein<ref name='LIB:Riley_2006'/>, B2105<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RcnR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | conserved protein<ref name='LIB:Riley_2006'/>, B2105<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RcnR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yohL|yohL]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yohL|yohL]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rcnR&loc=MG1655:2183818..2183546,W3110:2189130..2188858,DH10B:2274826..2274554 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2274826&end=2274554&gene=rcnR&aa=mshtirdkqklkaraskiqgqvvalkkmldephecaavlqqiaairgavnglmrevikghltehivhqgdelkreedldvvlkvldsyik Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcnR+AND+escherichia+coli Pubmed(rcnR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rcnR Textpresso(rcnR)] | |||
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Revision as of 23:13, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rcnR |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
DNA-binding transcriptional regulator[2]; RcnR transcriptional repressor[3] Transcriptional repressor of rcnA; nickel- and cobalt-responsive[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The RcnR-rcnA promoter interaction is inhibited by nickel and cobalt; an rcnR mutant constitutively expresses rcnA (Iwig, 2006). rcnR and frmR are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.