rbfA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rbfA'' | ''rbfA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3156, b3167, JW3136, yhbB, P15b, sdr-43''<ref name='LIB:Riley_2006'/> | ''ECK3156, b3167, JW3136, yhbB, P15b, sdr-43''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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30S ribosome binding factor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | 30S ribosome binding factor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA<ref name='LIB:EcoGene'/> | Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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30s ribosome binding factor<ref name='LIB:Riley_2006'/>, B3167<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RbfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 30s ribosome binding factor<ref name='LIB:Riley_2006'/>, B3167<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RbfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Biological Process''' | |||
* GO:0030490 maturation of SSU-rRNA ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp|metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp|metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rbfA&loc=MG1655:3311200..3310799,W3110:3313033..3312632,REL606:3248412..3248011,DH10B:3408945..3408544 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3408945&end=3408544&gene=rbfA&aa=makefgrpqrvaqemqkeialilqreikdprlgmmttvsgvemsrdlayakvyvtflndkdedavkagikalqeasgfirsllgkamrlrivpeltffydnslvegmrmsnlvtsvvkhdeerrvnpddsked Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rbfA+AND+escherichia+coli Pubmed(rbfA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rbfA Textpresso(rbfA)] | |||
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Revision as of 00:22, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rbfA |
|---|---|
| Gene Synonym(s) |
ECK3156, b3167, JW3136, yhbB, P15b, sdr-43[1] |
| Product Desc. |
30S ribosome binding factor[2][3] Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA[4] |
| Product Synonyms(s) |
30s ribosome binding factor[1], B3167[2][1], YhbB[2][1], RbfA[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.