prpD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''prpD'' | ''prpD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0331, b0334, JW0325, acnC, yahT''<ref name='LIB:Riley_2006'/> | ''ECK0331, b0334, JW0325, acnC, yahT''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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G6199<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | G6199<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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2-Methylcitrate dehydratase, 2-methylisocitrate hydratase; propionate catabolism via 2-methlycitrate cycle; active on citrate and isocitrate; responsible for residual apparent aconitase activity in acnAB double mutant; monomeric iron-sulfur protein<ref name='LIB:EcoGene'/> | 2-Methylcitrate dehydratase, 2-methylisocitrate hydratase; propionate catabolism via 2-methlycitrate cycle; active on citrate and isocitrate; responsible for residual apparent aconitase activity in acnAB double mutant; monomeric iron-sulfur protein<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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2-methylcitrate dehydratase<ref name='LIB:Riley_2006'/>, B0334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcnC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YahT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 2-methylcitrate dehydratase<ref name='LIB:Riley_2006'/>, B0334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcnC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YahT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0016052 carbohydrate catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0019679 propionate metabolic process, methylcitrate cycle ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0047547 2-methylcitrate dehydratase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:prpB|prpB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:prpBCDE|prpBCDE]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:prpB|prpB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:prpBCDE|prpBCDE]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=prpD&loc=MG1655:350439..351890,W3110:350439..351890,REL606:323865..325316 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=323865&end=325316&gene=prpD&aa=msaqinnirpefdreivdivdyvmnyeisskvaydtahyclldtlgcglealeypackkllgpivpgtvvpngvrvpgtqfqldpvqaafnigamirwldfndtwlaaewghpsdnlggilatadwlsrnavasgkapltmkqvltamikaheiqgcialensfnrvgldhvllvkvastavvaemlgltreeilnavslawvdgqslrtyrhapntgtrkswaagdatsravrlalmaktgemgypsaltapvwgfydvsfkgesfrfqrpygsyvmenvlfkisfpaefhsqtaveaamtlyeqmqaagktaadiekvtirtheaciriidkkgplnnpadrdhciqymvaipllfgrltaadyednvaqdkridalrekincfedpaftadyhdpekraianaitleftdgtrfeevvveypigharrrqdgipklvdkfkinlarqfptrqqqrilevsldrarleqmpvneyldlyvi Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=prpD+AND+escherichia+coli Pubmed(prpD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=prpD Textpresso(prpD)] | |||
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Revision as of 00:16, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
prpD |
|---|---|
| Gene Synonym(s) |
ECK0331, b0334, JW0325, acnC, yahT[1] |
| Product Desc. |
2-Methylcitrate dehydratase, 2-methylisocitrate hydratase; propionate catabolism via 2-methlycitrate cycle; active on citrate and isocitrate; responsible for residual apparent aconitase activity in acnAB double mutant; monomeric iron-sulfur protein[4] |
| Product Synonyms(s) |
2-methylcitrate dehydratase[1], B0334[2][1], AcnC[2][1], YahT[2][1], PrpD[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Crp regulon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.