ppiD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ppiD'' | ''ppiD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0435, b0441, JW0431, ybaU''<ref name='LIB:Riley_2006'/> | ''ECK0435, b0441, JW0431, ybaU''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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G6242<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | G6242<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Peptidylprolyl-cis-trans-isomerase D, rotamase; involved in the folding of outer membrane proteins<ref name='LIB:EcoGene'/> | Peptidylprolyl-cis-trans-isomerase D, rotamase; involved in the folding of outer membrane proteins<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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peptidyl-prolyl cis-trans isomerase (rotamase D)<ref name='LIB:Riley_2006'/>, B0441<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpiD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | peptidyl-prolyl cis-trans isomerase (rotamase D)<ref name='LIB:Riley_2006'/>, B0441<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpiD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ppiD|ppiD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ppiD|ppiD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ppiD&loc=MG1655:461139..463010,W3110:461139..463010,DH10B:400470..402341,REL606:433970..435841 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=433970&end=435841&gene=ppiD&aa=mmdslrtaanslvlkiifgiiivsfiltgvsgyligggnnyaakvndqeisrgqfenafnsernrmqqqlgdqyselaanegymktlrqqvlnrlidealldqyarelklgisdeqvkqaifatpafqvdgkfdnsryngilnqmgmtadqyaqalrnqlttqqlingvagtdfmlkgetdelaalvaqqrvvreatidvnalaakqpvteqeiasyyeqnknnfmtpeqfrvsyikldaatmqqpvsdadiqsyydqhqdqftqpqrtrysiiqtktedeakavldelnkggdfaalakeksadiisarnggdmgwledatipdelknaglkekgqlsgvikssvgflivrlddiqpakvksldevrddiaakvkhekaldayyalqqkvsdaasndteslagaeqaagvkatqtgwfskdnlpeelnfkpvadaifngglvgengapginsdiitvdgdrafvlrisehkpeavkpladvqeqvkalvqhnkaeqqakvdaekllvdlkagkgaeamqaaglkfgepktlsrsgrdpisqaafalplpakdkpsygmatdmqgnvvllaldevkqgsmpedqkkamvqgitqnnaqivfealmsnlrkeakikigdaleqq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ppiD+AND+escherichia+coli Pubmed(ppiD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ppiD Textpresso(ppiD)] | |||
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Revision as of 00:19, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ppiD |
|---|---|
| Gene Synonym(s) |
ECK0435, b0441, JW0431, ybaU[1] |
| Product Desc. |
Peptidylprolyl-cis-trans-isomerase D, rotamase; involved in the folding of outer membrane proteins[4] |
| Product Synonyms(s) |
peptidyl-prolyl cis-trans isomerase (rotamase D)[1], B0441[2][1], YbaU[2][1], PpiD[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
PpiD is a periplasmic enyzyme with N-terminal membrane anchor. Heat-inducible. An fkpA, surA, ppiB, ppiD quadruple mutant is viable.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.