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{{Tab On|Quickview|yhjY}}{{Tab|Gene|yhjY}}{{Tab|Gene Product(s)|yhjY}}{{Tab|Expression|yhjY}}{{Tab|Evolution|yhjY}}{{Tab|On One Page|yhjY}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yhjY:Gene|''yhjY]]'' (synonyms: ''ECK3535, b3548, JW5659'')<ref name='LIB:Riley_2006'/>
''yhjY''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yhjY:Gene_Product(s)|YhjY product]]<ref name='LIB:Riley_2006'/>: conserved protein product, B3548 product
''ECK3535, b3548, JW5659''<ref name='LIB:Riley_2006'/>, JW5659''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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conserved protein<ref name='LIB:EcoCyc10.6'/> putative lipase<ref name='LIB:EcoCyc11.1'/>  
conserved protein<ref name='LIB:EcoCyc10.6'/>; putative lipase<ref name='LIB:EcoCyc11.1'/>


Putative outer membrane protein, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''conserved protein<ref name='LIB:Riley_2006'/>, B3548<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhjY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3535, JW5659, b3548''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yhjY|yhjY]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yhjY|yhjY]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yhjY&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12269]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002150&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yhjY&loc=MG1655%3A3710957..3710259,W3110%3A3927481..3928179,REL606%3A3643392..3642694,DH10B%3A3808534..3807836,BW2952%3A3598585..3599283]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3598585&end=3599283&gene=yhjY&aa=mlmiikksggrwqlsllasvvisafflntayawqqeyivdtqpglsterytwdsdhqpdyndilsqriqssqralglevnlaeetpvdvtssmsmgwnfplyeqvttgpvaalhydgtttsmynefgdstttltdplwhasvstlgwrvdsrlgdlrpwaqisynqqfgeniwkaqsglsrmtatnqngnwldvtvgadmllnqniaayaaltqaenttnnsdylytmgvsarf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhjY+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yhjY]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Predicted 30 aa signal peptide is consistent with an observed precursor cleavage, blocked by azide. The Salmonella yhjY ortholog is regulated by RpoS.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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<references/>
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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yhjY

Gene Synonym(s)

ECK3535, b3548, JW5659[1], JW5659

Product Desc.

conserved protein[2]; putative lipase[3]

Putative outer membrane protein, function unknown[4]

Product Synonyms(s)

conserved protein[1], B3548[2][1], YhjY[2][1] , ECK3535, JW5659, b3548

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yhjY[2]

Regulation/Activity
Quick Links



        

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Notes

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Predicted 30 aa signal peptide is consistent with an observed precursor cleavage, blocked by azide. The Salmonella yhjY ortholog is regulated by RpoS.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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