pbpG:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''pbpG''  
''pbpG''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2127, b2134, JW5355, yohB''<ref name='LIB:Riley_2006'/>
''ECK2127, b2134, JW5355, yohB''<ref name='LIB:Riley_2006'/>, yohB''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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penicillin-binding protein 7<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
penicillin-binding protein 7<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect<ref name='LIB:EcoGene'/>
Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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D-alanyl-D-alanine endopeptidase<ref name='LIB:Riley_2006'/>, B2134<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''D-alanyl-D-alanine endopeptidase<ref name='LIB:Riley_2006'/>, B2134<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2127, JW5355, yohB, b2134''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:pbpG|pbpG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:pbpG|pbpG]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pbpG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12015]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001933&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pbpG&loc=MG1655%3A2222892..2221960,W3110%3A2228204..2227272,DH10B%3A2313900..2312968,REL606%3A2176108..2175176,BW2952%3A2114443..2115375]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2114443&end=2115375&gene=pbpG&aa=mlimpkfrvslfslalmlavpfapqavaktaaattasqpeiasgsamivdlntnkviysnhpdlvrpiasisklmtamvvldarlpldeklkvdisqtpemkgvysrvrlnseisrkdmlllalmssenraaaslahhypggykafikamnakakslgmnntrfveptglsvhnvstardltklliaskqypligqlsttredmatfsnptytlpfrntnhlvyrdnwniqltktgftnaaghclvmrtvinnkpvalvvmdafgkythfadasrlrtwietgkvmpvpaaalsykkqkaaqmaaagqtaqnd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pbpG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pbpG]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pbpG

Gene Synonym(s)

ECK2127, b2134, JW5355, yohB[1], yohB

Product Desc.

penicillin-binding protein 7[2][3]

Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect[4]

Product Synonyms(s)

D-alanyl-D-alanine endopeptidase[1], B2134[2][1], YohB[2][1], PbpG[2][1] , ECK2127, JW5355, yohB, b2134

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pbpG[2]

Regulation/Activity
Quick Links



        

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Notes

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PBP8 is an artifactual OmpT-cleaved proteolytic degradation product of PBP7. PBP7 and PBP8 are also referred to as PBP8a and PBP8b. Earlier conventions had the PBP7 amd PBP8 names reversed.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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