ispE:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ispE''  
''ispE''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1196, b1208, JW1199, IPK, ychB''<ref name='LIB:Riley_2006'/>
''ECK1196, b1208, JW1199, IPK, ychB''<ref name='LIB:Riley_2006'/>, ipk, ychB''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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EG11294<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
EG11294<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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4-diphosphocytidyl-2-C-methylerythritol kinase; isopentenyl phosphate kinase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene<ref name='LIB:EcoGene'/>
4-diphosphocytidyl-2-C-methylerythritol kinase; isopentenyl phosphate kinase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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4-diphosphocytidyl-2-C-methylerythritol kinase<ref name='LIB:Riley_2006'/>, B1208<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ipk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YchB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''4-diphosphocytidyl-2-C-methylerythritol kinase<ref name='LIB:Riley_2006'/>, B1208<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ipk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YchB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1196, ipk, JW1199, ychB, b1208''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lolB-ispE-prsA|lolB-ispE-prsA]]<ref name='LIB:EcoCyc10.6'/>, lolB-ispE-prs  
transcription unit(s): [[:Category:Txn_unit:lolB-ispE-prsA|lolB-ispE-prsA]]<ref name='LIB:EcoCyc10.6'/>, lolB-ispE-prs  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ispE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11294]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001267&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ispE&loc=MG1655%3A1262100..1261249,W3110%3A1264454..1263603,DH10B%3A1302341..1301490,REL606%3A1263027..1262176,BW2952%3A1149970..1150821]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1149970&end=1150821&gene=ispE&aa=mrtqwpspaklnlflyitgqradgyhtlqtlfqfldygdtisielrddgdirlltpvegvehednlivraarllmktaadsgrlptgsganisidkrlpmggglgggssnaatvlvalnhlwqcglsmdelaemgltlgadvpvfvrghaafaegvgeiltpvdppekwylvahpgvsiptpvifkdpelprntpkrsietllkcefsndceviarkrfrevdavlswlleyapsrltgtgacvfaefdtesearqvleqapewlngfvakganlsplhraml]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ispE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ispE]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ispE

Gene Synonym(s)

ECK1196, b1208, JW1199, IPK, ychB[1], ipk, ychB

Product Desc.

EG11294[2][3];

Component of 4-diphosphocytidyl-2-C-methylerythritol kinase[3]

4-diphosphocytidyl-2-C-methylerythritol kinase; isopentenyl phosphate kinase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene[4]

Product Synonyms(s)

4-diphosphocytidyl-2-C-methylerythritol kinase[1], B1208[2][1], Ipk[2][1], YchB[2][1], IspE[2][1] , ECK1196, ipk, JW1199, ychB, b1208

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lolB-ispE-prsA[2], lolB-ispE-prs

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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