glgA:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00534 PFAM:PF00534]
[http://pfam.janelia.org/family/PF00534 PF00534 Glycosyl transferases group 1]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12526:SF188 PTHR12526:SF188]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53756 SUPERFAMILY:53756]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08323 PF08323  Starch synthase catalytic domain]
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[[EcoCyc]]
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EcoCyc:EG10377
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10377
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000370
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0372
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011200
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000622 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G24300 (score: 1.000; bootstrap: 69%)
  • AT3G01180 (score: 0.226)
  • AT1G32900 (score: 0.070)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231973 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q43654 (score: 1.000; bootstrap: 66%)
  • Q9SQH0 (score: 0.995)
  • Q9LEC0 (score: 0.994)
  • Q9SQG9 (score: 0.993)
  • Q9M5A3 (score: 0.967)
  • Q5WA90 (score: 0.786)
  • Q7Y044 (score: 0.784)
  • O49064 (score: 0.782)
  • Q40739 (score: 0.689)
  • Q9SBL2 (score: 0.676)
  • Q7XE48 (score: 0.187)
  • O48899 (score: 0.186)
  • O48900 (score: 0.182)
  • Q6Z2T8 (score: 0.182)
  • Q6RG16 (score: 0.180)
  • Q5DWW9 (score: 0.180)
  • Q9LEE2 (score: 0.170)
  • Q8H1Y8 (score: 0.169)
  • Q9LEE3 (score: 0.167)
  • Q9SPM9 (score: 0.167)
  • Q8H1Y7 (score: 0.166)
  • Q8H1Y9 (score: 0.165)
  • Q9M466 (score: 0.163)
  • O24398 (score: 0.163)
  • Q94LY7 (score: 0.063)
  • Q71F57 (score: 0.063)
  • Q8L699 (score: 0.063)
  • P19395 (score: 0.063)
  • Q42968 (score: 0.062)
  • Q9S7U4 (score: 0.062)
  • Q8GZD6 (score: 0.062)
  • Q8S9C4 (score: 0.061)
  • Q5NKR6 (score: 0.061)
  • Q6L798 (score: 0.061)
  • Q5NKS5 (score: 0.061)
  • Q43134 (score: 0.061)
  • Q9SLS6 (score: 0.060)
  • Q9SXK3 (score: 0.058)
  • Q9FUU6 (score: 0.058)
  • Q8LNZ0 (score: 0.058)
  • P04713 (score: 0.058)
  • Q9SLS9 (score: 0.058)
  • Q5NKP6 (score: 0.057)
  • Q760G1 (score: 0.056)
  • Q6L799 (score: 0.056)
  • P09842 (score: 0.056)
  • Q9S7N5 (score: 0.055)
  • Q84QW7 (score: 0.055)
  • Q7G050 (score: 0.055)
  • Q9SLS7 (score: 0.055)
  • Q5NKR2 (score: 0.055)
  • Q8W2G8 (score: 0.054)
  • Q9SQ51 (score: 0.054)
  • Q43012 (score: 0.054)
  • Q9SQ52 (score: 0.053)
  • Q9SLS8 (score: 0.053)
  • Q6L797 (score: 0.053)
  • Q9SXK4 (score: 0.052)
  • Q9SYU0 (score: 0.051)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC15271 (score: 1.000; bootstrap: 100%)
  • SPCC12811 (score: 0.487)
  • SPBC16D105 (score: 0.475)
  • SPBC32H83c (score: 0.342)
  • SPCC634 (score: 0.211)

From Inparanoid:20070104

Shigella flexneri

GLGA

From SHIGELLACYC

E. coli O157

GLGA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00534 Glycosyl transferases group 1

Panther (EcoliWiki Page)

PTHR12526:SF188

Superfamily (EcoliWiki Page)

SUPERFAMILY:53756

Pfam (EcoliWiki Page)

PF08323 Starch synthase catalytic domain

EcoCyc

EcoCyc:EG10377

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10377

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000370

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0372

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011200

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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