gcvT:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01571 PFAM:PF01571]
[http://pfam.janelia.org/family/PF01571 PF01571 Aminomethyltransferase folate-binding domain]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13847:SF5 PTHR13847:SF5]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=101790 SUPERFAMILY:101790]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=103025 SUPERFAMILY:103025]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08669 PF08669  Glycine cleavage T-protein C-terminal barrel domain]
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[[EcoCyc]]
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EcoCyc:EG11442
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11442
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001406
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1412
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0009536
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000012075 (score: 1.000; bootstrap: 87%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000022475 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G11860 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000002992 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030937 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017765 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000016880 (score: 1.000; bootstrap: 91%)
  • ENSCAFP00000009876 (score: 0.416)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000004210 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000012157 (score: 0.431)
  • ENSCINP00000015639 (score: 0.422)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041010-114 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-041010-114 (score: 1.000; bootstrap: 99%)
  • ZDB-GENE-050522-138 (score: 0.081)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231218 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0032287 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19575-PA (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007139 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000004490 (score: 0.195)
  • ENSGALP00000004232 (score: 0.153)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000273588 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007210 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000017532 (score: 0.244)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000016231 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Mus musculus

  • MGI:3646700 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000025761 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000030481 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR019C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC31G54 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000177134 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00008972001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000012982 (score: 1.000; bootstrap: 95%)
  • ENSXETP00000013066 (score: 0.162)

From Inparanoid:20070104

Shigella flexneri

GCVT

From SHIGELLACYC

E. coli O157

GCVT

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01571 Aminomethyltransferase folate-binding domain

Panther (EcoliWiki Page)

PTHR13847:SF5

Superfamily (EcoliWiki Page)

SUPERFAMILY:101790

Superfamily (EcoliWiki Page)

SUPERFAMILY:103025

Pfam (EcoliWiki Page)

PF08669 Glycine cleavage T-protein C-terminal barrel domain

EcoCyc

EcoCyc:EG11442

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11442

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001406

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1412

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009536

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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