fumA:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="B49aee6b1083c8"  class=" tableEdit New_Quickview_Table"   
{|   id="B49aee6b1083c8"  class=" tableEdit New_Quickview_Table"   


|-
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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''fumA''  
''fumA''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1607, b1612, JW1604''<ref name='LIB:Riley_2006'/>
''ECK1607, b1612, JW1604''<ref name='LIB:Riley_2006'/>, JW1604''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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fumarase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
fumarase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Fumarase A, aerobic; negatively regulated by ryhB RNA as part of indirect positive regulation by Fur<ref name='LIB:EcoGene'/>
Fumarase A, aerobic; negatively regulated by ryhB RNA as part of indirect positive regulation by Fur<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fumarate hydratase (fumarase A), aerobic Class I<ref name='LIB:Riley_2006'/>, B1612<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FumA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''fumarate hydratase (fumarase A), aerobic Class I<ref name='LIB:Riley_2006'/>, B1612<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FumA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1607, JW1604, b1612''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fumA|fumA]]<ref name='LIB:EcoCyc10.6'/>, OP00145  
transcription unit(s): [[:Category:Txn_unit:fumA|fumA]]<ref name='LIB:EcoCyc10.6'/>, OP00145  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fumA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10356]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000349&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fumA&loc=MG1655%3A1686401..1684755,W3110%3A1690091..1688445,DH10B%3A1777362..1775716,REL606%3A1665572..1663926,BW2952%3A1576814..1578460]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1576814&end=1578460&gene=fumA&aa=msnkpfhyqapfplkkddteyylltsehvsvsefegqeilkvapealtllarqafhdasfmlrpahqqqvadilrdpeasendkyvalqflrnsdiaakgvlptcqdtgtaiivgkkgqrvwtgggdeaalargvyntyiednlrysqnapldmykevntgtnlpaqidlyavdgdeykflciakgggsanktylyqetkalltpgklknylvekmrtlgtaacppyhiafviggtsaetnlktvklasakyydelptegnehgqafrdvelekellieaqnlglgaqfggkyfahdirvirlprhgascpvgmgvscsadrnikakinrqgiwieklehnpgkyipeelrkagegeavrvdlnrpmkeilaqlsqypvstrlslngtiivgrdiahaklkermdngeglpqyikdhpiyyagpaktpegyasgslgpttagrmdsyvdqlqaqggsmimlakgnrsqqvtdackkhggfylgsiggpaavlaqgsikslecveypelgmeaiwkievedfpafilvddkgndffqqiqltqctrcvk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fumA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fumA]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fumA

Gene Synonym(s)

ECK1607, b1612, JW1604[1], JW1604

Product Desc.

fumarase A[2][3];

Component of fumarase A[2][3]

Fumarase A, aerobic; negatively regulated by ryhB RNA as part of indirect positive regulation by Fur[4]

Product Synonyms(s)

fumarate hydratase (fumarase A), aerobic Class I[1], B1612[2][1], FumA[2][1] , ECK1607, JW1604, b1612

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fumA[2], OP00145

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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