ftnA:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00210 PFAM:PF00210]
[http://pfam.janelia.org/family/PF00210 PF00210 Ferritin-like domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=47240 SUPERFAMILY:47240]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11431:SF4 PTHR11431:SF4]
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[[EcoCyc]]
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EcoCyc:EG10921
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10921
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000912
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0914
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006342
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000163 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000019996 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G40300 (score: 1.000; bootstrap: 100%)
  • AT3G56090 (score: 0.733)
  • AT3G11050 (score: 0.602)
  • AT5G01600 (score: 0.573)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00024156 (score: 1.000; bootstrap: 100%)
  • WBGene00033041 (score: 0.769)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000002273 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000026412 (score: 0.452)
  • ENSMODP00000005165 (score: 0.388)
  • ENSMODP00000009409 (score: 0.388)
  • ENSMODP00000002263 (score: 0.369)
  • ENSMODP00000017165 (score: 0.252)
  • ENSMODP00000007163 (score: 0.246)
  • ENSMODP00000025098 (score: 0.166)
  • ENSMODP00000023431 (score: 0.163)

From Inparanoid:20070104

Oryza gramene

  • P29390 (score: 1.000; bootstrap: 100%)
  • P29036 (score: 0.852)
  • Q5G1L6 (score: 0.744)
  • Q8LK80 (score: 0.733)
  • Q6DQK1 (score: 0.733)
  • Q8L5K0 (score: 0.733)
  • Q94KA2 (score: 0.721)
  • Q6VVA5 (score: 0.441)
  • Q945F6 (score: 0.441)
  • Q4FCZ8 (score: 0.429)

From Inparanoid:20070104

Shigella flexneri

FTN

From SHIGELLACYC

E. coli O157

FTN

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00210 Ferritin-like domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47240

Panther (EcoliWiki Page)

PTHR11431:SF4

EcoCyc

EcoCyc:EG10921

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10921

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000912

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0914

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006342

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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