cadB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''cadB''  
''cadB''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4126, b4132, JW4093''<ref name='LIB:Riley_2006'/>
''ECK4126, b4132, JW4093''<ref name='LIB:Riley_2006'/>, JW4093''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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CadB cadaverine/lysine APC exchanger<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
CadB cadaverine/lysine APC exchanger<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Lysine-cadaverine antiporter<ref name='LIB:EcoGene'/>
Lysine-cadaverine antiporter<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted lysine/cadaverine transporter product<ref name='LIB:Riley_2006'/>, B4132 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CadB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted lysine/cadaverine transporter<ref name='LIB:Riley_2006'/>, B4132<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CadB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4126, JW4093, b4132''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cadBA|cadBA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cadBA|cadBA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cadB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10132]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000128&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cadB&loc=MG1655%3A4358054..4356720,W3110%3A4364709..4363375,REL606%3A4338751..4337417,DH10B%3A4458416..4457082,BW2952%3A4295455..4296789]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4295455&end=4296789&gene=cadB&aa=mssakkiglfactgvvagnmmgsgiallpanlasiggiaiwgwiisiigamslayvyarlatknpqqggpiayageispafgfqtgvlyyhanwignlaigitavsylstffpvlndpvpagiaciaivwvftfvnmlggtwvsrlttiglvlvlipvvmtaivgwhwfdaatyaanwntadttdghaiiksillclwafvgvesaavstgmvknpkrtvplatmlgtglagivyiaatqvlsgmypssvmaasgapfaisastilgnwaaplvsaftafacltslgswmmlvgqagvraandgnfpkvygevdsngipkkglllaavkmtalmilitlmnsaggkasdlfgeltgiavlltmlpyfyscvdlirfegvnirnfvslicsvlgcvfcfialmgassfelagtfivsliilmfyarkmherqshsmdnhtasnah]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cadB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cadB]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cadB

Gene Synonym(s)

ECK4126, b4132, JW4093[1], JW4093

Product Desc.

CadB cadaverine/lysine APC exchanger[2][3]

Lysine-cadaverine antiporter[4]

Product Synonyms(s)

predicted lysine/cadaverine transporter[1], B4132[2][1], CadB[2][1] , ECK4126, JW4093, b4132

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cadBA[2]

Regulation/Activity
Quick Links



        

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Notes

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Induction of the cadBA operon under acidic conditions and in the presence of lycine neutralized extracellualr environment and enabled production of CO(2); production of cadaverine and aminopropylcadaverine instead of putrescine and spermidine also resulted. cadAB operon induction also generated a proton motive force. Lack of cadBA opereon induction results in an increase in speF-potE operon expression.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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