alsB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="Z49aedfb7a5851"  class=" tableEdit New_Quickview_Table"   
{|   id="Z49aedfb7a5851"  class=" tableEdit New_Quickview_Table"   


|-
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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''alsB''  
''alsB''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4081, b4088, JW4049, yjcX''<ref name='LIB:Riley_2006'/>
''ECK4081, b4088, JW4049, yjcX''<ref name='LIB:Riley_2006'/>, yjcX''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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YjcX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
YjcX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Allose-binding protein, periplasmic<ref name='LIB:EcoGene'/>
Allose-binding protein, periplasmic<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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D-allose transporter subunit product<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily product<ref name='LIB:Riley_2006'/>, B4088 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcX product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlsB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''D-allose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4088<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcX product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4081, JW4049, yjcX, b4088''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:alsRBACE|alsRBACE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:alsRBACE|alsRBACE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=alsB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12458]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002305&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=alsB&loc=MG1655%3A4310065..4309130,W3110%3A4316720..4315785,DH10B%3A4410427..4409492,REL606%3A4290864..4289929,BW2952%3A4247865..4248800]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4247865&end=4248800&gene=alsB&aa=mnkylkyfsgtlvglmlstsafaaaeyavvlktlsnpfwvdmkkgiedeaktlgvsvdifaspsegdfqsqlqlfedlsnknykgiafaplssvnlvmpvarawkkgiylvnldekidmdnlkkaggnveafvttdnvavgakgasfiidklgaeggevaiiegkagnasgearrngateafkkasqiklvasqpadwdrikaldvatnvlqrnpnikaiycandtmamgvaqavanagktgkvlvvgtdgipearkmveagqmtatvaqnpadigatglklmvdaeksgkvipldkapefklvdsilvtq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=alsB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=alsB]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

alsB

Gene Synonym(s)

ECK4081, b4088, JW4049, yjcX[1], yjcX

Product Desc.

YjcX[2][3];

Component of D-allose ABC transporter[2][3]

Allose-binding protein, periplasmic[4]

Product Synonyms(s)

D-allose transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B4088[2][1], YjcX product[2][1], AlsB[2][1] , ECK4081, JW4049, yjcX, b4088

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): alsRBACE[2]

Regulation/Activity
Quick Links



        

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Notes

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First 23 aa are predicted to be a type I signal peptide. HT_Cmplx28_Mem: AlsB+RbsB.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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