xanQ:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''xanQ''  
''xanQ''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2878, b2882, JW2850''<ref name='LIB:Riley_2006'/>, ygfO product
''ECK2878, b2882, JW2850'', ygfO<ref name='LIB:Riley_2006'/>, JW2850, ygfO''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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YgfO NCS2 tranporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
YgfO NCS2 transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Xanthine permease<ref name='LIB:EcoGene'/>
Xanthine permease<ref name='LIB:EcoGene'/> <ref name='PMID:16096267'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted transporter<ref name='LIB:Riley_2006'/>, B2882<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted transporter<ref name='LIB:Riley_2006'/>, B2882<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/><ref name='PMID:19581302'/> , ECK2878, JW2850, ygfO, b2882''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ygfO&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ygfO&loc=MG1655%3A3022373..3023773,W3110%3A3023007..3024407,DH10B%3A3116243..3117643,REL606%3A2910105..2911505,BW2952%3A2909521..2910921]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2909521&end=2910921&gene=ygfO&aa=msdinhagsdlifeledrppfhqalvgaithllaifvpmvtpalivgaalqlsaettaylvsmamiasgigtwlqvnrygivgsgllsiqsvnfsfvtvmialgssmksdgfheelimssllgvsfvgaflvvgssfilpylrrvitptvsgivvlmiglslikvgiidfgggfaakssgtfgnyehlgvgllvlivvigfnccrspllrmggiaiglcvgyiaslclgmvdfssmrnlplitiphpfkygfsfsfhqflvvgtiyllsvleavgditatamvsrrpiqgeeyqsrlkggvladglvsviasavgslplttfaqnngviqmtgvasryvgrtiavmlvilglfpmiggffttipsavlggamtlmfsmiaiagiriiitnglkrretlivatslglglgvsydpeifkilpasiyvlvenpicaggltaillniilpggyrqenvlpgitsaeemd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygfO+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ygfO]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

xanQ

Gene Synonym(s)

ECK2878, b2882, JW2850, ygfO[1], JW2850, ygfO

Product Desc.

YgfO NCS2 transporter[2][3]

Xanthine permease[4] [5]

Product Synonyms(s)

predicted transporter[1], B2882[2][1], YgfO[2][1][6] , ECK2878, JW2850, ygfO, b2882

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): xanQ[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Karatza, P & Frillingos, S () Cloning and functional characterization of two bacterial members of the NAT/NCS2 family in Escherichia coli. Mol. Membr. Biol. 22 251-61 PubMed
  6. ↑ Karena, E & Frillingos, S (2009) Role of intramembrane polar residues in the YgfO xanthine permease: HIS-31 and ASN-93 are crucial for affinity and specificity, and ASP-304 and GLU-272 are irreplaceable. J. Biol. Chem. 284 24257-68 PubMed
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