nemR:Quickview: Difference between revisions
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{| | {| id="H4a79c51832fa3" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''nemR'' | |||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1645, b1649, JW5874'', ydhM<ref name='LIB:Riley_2006'/>, JW5874, ydhM'' | |||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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hypothetical protein<ref name='LIB:EcoCyc10.6'/>; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/>. YdhM binding to the <em>ydhM-nemA</em> promoter is reduced by addition of NEM. Genomic SELEX identifies a binding site for YdhM in the <em>ydhM-nemA</em> promoter region. <ref name='PMID:18567656'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1649<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1645, JW5874, ydhM, b1649'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=nemR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6889]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003478&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=nemR&loc=MG1655%3A1724131..1724646,W3110%3A1727821..1728336,BW2952%3A1616106..1616705]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1616106&end=1616705&gene=nemR&aa=mnkhtehdtrehllatgeqlclqrgftgmglsellktaevpkgsfyhyfrskeafgvamlerhyaayhqrltellqsgegnyrdrilayyqqtlnqfcqhgtisgcltvklsaevcdlsedmrsamdkgargviallsqalengrenhcltfcgeplqqaqvlyalwlganlqakisrsfeplenalahvkniiatpav]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nemR+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=nemR]] | |||
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Latest revision as of 21:56, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
nemR |
|---|---|
| Gene Synonym(s) |
ECK1645, b1649, JW5874, ydhM[1], JW5874, ydhM |
| Product Desc. |
hypothetical protein[2]; predicted DNA-binding transcriptional regulator[3]. YdhM binding to the ydhM-nemA promoter is reduced by addition of NEM. Genomic SELEX identifies a binding site for YdhM in the ydhM-nemA promoter region. [4] |
| Product Synonyms(s) |
predicted DNA-binding transcriptional regulator[1], B1649[2][1], YdhM[2][1] , ECK1645, JW5874, ydhM, b1649 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Umezawa, Y et al. (2008) The uncharacterized transcription factor YdhM is the regulator of the nemA gene, encoding N-ethylmaleimide reductase. J. Bacteriol. 190 5890-7 PubMed