yqjG:Evolution: Difference between revisions

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From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00043 PFAM:PF00043]
[http://pfam.janelia.org/family/PF00043 PF00043 Glutathione S-transferase, C-terminal domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=47616 SUPERFAMILY:47616]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52833 SUPERFAMILY:52833]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11260:SF75 PTHR11260:SF75]
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[[EcoCyc]]
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EcoCyc:G7616
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12746
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004169
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2602
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010203
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G45020 (score: 1.000; bootstrap: 98%)
  • AT4G19880 (score: 0.706)
  • AT5G44990 (score: 0.525)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006796 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231435 (score: 1.000; bootstrap: 99%)
  • DDB0184173 (score: 0.091)

From Inparanoid:20070104

Oryza gramene

  • Q6EQX0 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKR076W (score: 1.000; bootstrap: 100%)
  • YMR251W (score: 0.493)
  • YGR154C (score: 0.248)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC12817c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YQJG

From SHIGELLACYC

E. coli O157

YQJG

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00043 Glutathione S-transferase, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47616

Superfamily (EcoliWiki Page)

SUPERFAMILY:52833

Panther (EcoliWiki Page)

PTHR11260:SF75

EcoCyc

EcoCyc:G7616

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12746

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004169

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2602

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010203

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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