xanQ:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00860 PFAM:PF00860]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11119:SF3 PTHR11119:SF3]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00860 PF00860  Permease family]
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[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Caenorhabditis briggsae

  • WBGene00031101 (score: 1.000; bootstrap: 100%)
  • WBGene00039175 (score: 0.307)
  • WBGene00030168 (score: 0.291)
  • WBGene00030171 (score: 0.288)
  • WBGene00024937 (score: 0.277)
  • WBGene00030153 (score: 0.253)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00011595 (score: 1.000; bootstrap: 100%)
  • WBGene00011593 (score: 0.812)
  • WBGene00011596 (score: 0.492)
  • WBGene00020004 (score: 0.431)
  • WBGene00021994 (score: 0.308)
  • WBGene00008252 (score: 0.247)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037807 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19493-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000026307 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000001345 (score: 0.233)
  • ENSMMUP00000003100 (score: 0.089)
  • ENSMMUP00000001065 (score: 0.056)

From Inparanoid:20070104

Mus musculus

  • MGI:1859682 (score: 1.000; bootstrap: 100%)
  • MGI:1341903 (score: 0.562)
  • MGI:1917272 (score: 0.158)
  • MGI:104516 (score: 0.137)

From Inparanoid:20070104

Oryza gramene

  • Q6Z257 (score: 1.000; bootstrap: 100%)
  • Q6ZIE6 (score: 1.000; bootstrap: 100%)
  • Q6H5A2 (score: 0.874)
  • Q6Z7R7 (score: 0.827)
  • Q94DT2 (score: 0.808)
  • Q852B5 (score: 0.798)
  • Q41760 (score: 0.547)
  • Q851K4 (score: 0.529)
  • Q7XHQ9 (score: 0.081)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000028885 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000027048 (score: 0.564)
  • ENSRNOP00000030381 (score: 0.157)
  • ENSRNOP00000024667 (score: 0.133)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC13991c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

E. coli O157

YGFO

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR11119:SF3

Pfam (EcoliWiki Page)

PF00860 Permease family

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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