nirB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00070 PFAM:PF00070]
[http://pfam.janelia.org/family/PF00070 PF00070 Pyridine nucleotide-disulphide oxidoreductase]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01077 PF01077  Nitrite and sulphite reductase 4Fe-4S domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03460 PF03460  Nitrite/Sulfite reductase ferredoxin-like half domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF04324 PF04324  BFD-like [2Fe-2S] binding domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51905 SUPERFAMILY:51905]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51905 SUPERFAMILY:51905]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=56014 SUPERFAMILY:56014]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07992 PF07992  Pyridine nucleotide-disulphide oxidoreductase]
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[[EcoCyc]]
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EcoCyc:EG10653
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10653
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000646
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0647
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011003
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000001550 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000020649 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000346616 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008433 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Mus musculus

  • MGI:1918611 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000004475 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000033692 (score: 1.000; bootstrap: 69%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003848001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

NIRB

From SHIGELLACYC

E. coli O157

NIRB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00070 Pyridine nucleotide-disulphide oxidoreductase

Pfam (EcoliWiki Page)

PF01077 Nitrite and sulphite reductase 4Fe-4S domain

Pfam (EcoliWiki Page)

PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain

Pfam (EcoliWiki Page)

PF04324 BFD-like [2Fe-2S binding domain]

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Superfamily (EcoliWiki Page)

SUPERFAMILY:56014

Pfam (EcoliWiki Page)

PF07992 Pyridine nucleotide-disulphide oxidoreductase

EcoCyc

EcoCyc:EG10653

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10653

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000646

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0647

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011003

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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