UNAfold: Difference between revisions

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{{See|Help:Bioinformatics Tools|tools}}
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!align=left {{table heading style}} |Link/URL:
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[http://mfold.rna.albany.edu/ UNAfold]
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!align=left {{table heading style}} |What:
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Software package for folding of single stranded RNA or DNA
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!align=left {{table heading style}} |Who:
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*Nicholas R. Markham
*Michael Zuker
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== Short Description ==
== Short Description ==
[[Image:UNAFold_home.png|right|thumb|300px|Home Page]]
{{UserContentHelp}}
{{UserContentHelp}}
[[Image:Unafold_home.jpg|right|thumb|300px|Home Page]]
UNAfold (Unified Nucleic Acid folding) is a software package for folding of single stranded RNA or DNA as well as hybridization between strands.


== Links ==
http://dinamelt.bioinfo.rpi.edu/unafold/


UNAFold (Unified Nucleic Acid folding) is a software package for folding of single stranded RNA or DNA as well as hybridization between strands.


Links to sites that run the software or where it can be obtained
== Links ==
UNAFold web site [http://mfold.rna.albany.edu/ home page].<br />
UNAFold software [http://mfold.rna.albany.edu/?q=DINAMelt/software download].<br />
UNAFold [http://mfold.rna.albany.edu/?q=unafold-man-pages man pages].


== Requirements ==
== Requirements ==
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**GD Library - for static graphics in hybrid-plot-ng
**GD Library - for static graphics in hybrid-plot-ng
**gnuplot - for plots in hybrid2.pl
**gnuplot - for plots in hybrid2.pl
Hardware/Software requirements, if applicable


== User notes ==
== User notes ==


== See Also ==
== See Also ==
[[mfold]]


== References ==
== References ==

Latest revision as of 17:48, 6 September 2011

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Link/URL:

UNAfold

What:

Software package for folding of single stranded RNA or DNA

Who:
  • Nicholas R. Markham
  • Michael Zuker



Short Description

Home Page

Share your knowledge and ideas. How you can help. See Help pages if you need help with using the wiki


UNAFold (Unified Nucleic Acid folding) is a software package for folding of single stranded RNA or DNA as well as hybridization between strands.

Links

UNAFold web site home page.
UNAFold software download.
UNAFold man pages.

Requirements

  • Perl 5.6.1 or greater
  • Programs/libraries which extend the functionality of UNAFold:
    • glut/OpenGL - for interactive graphics in hybrid-plot
    • GD Library - for static graphics in hybrid-plot-ng
    • gnuplot - for plots in hybrid2.pl

User notes

See Also

mfold

References

See Help:References for how to manage references in EcoliWiki.