glpF:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
touch
 
(15 intermediate revisions by 3 users not shown)
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|glpF}}{{Tab|Gene|glpF}}{{Tab|Gene Product(s)|glpF}}{{Tab|Expression|glpF}}{{Tab On|Evolution|glpF}}{{Tab|On One Page|glpF}}{{TabsBottom}}
{{Tab|Quickview|glpF}}{{Tab|Gene|glpF}}{{Tab|Gene Product(s)|glpF}}{{Tab|Expression|glpF}}{{Tab On|Evolution|glpF}}{{Tab|On One Page|glpF}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..W46a092e2b6ff7-->
{{BacktoTop}}
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.C46ac0fd9893e2-->
{|class = 'sortable' {{Prettytable}} id='92895'
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="C46ac0fd9893e2"  class=" tableEdit Evolution_homologs_table" 
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
|-
|-  
|
|
''Anopheles gambiae''   
''Anopheles gambiae''   
Line 24: Line 39:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
Line 31: Line 46:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Bos taurus''   
''Bos taurus''   
Line 40: Line 55:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
Line 50: Line 65:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
Line 61: Line 76:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Canis familiaris''   
''Canis familiaris''   
Line 70: Line 85:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Ciona intestinalis''   
''Ciona intestinalis''   
Line 77: Line 92:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Danio rerio''   
''Danio rerio''   
Line 92: Line 107:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
Line 100: Line 115:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Drosophila melanogaster''   
''Drosophila melanogaster''   
Line 110: Line 125:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
Line 117: Line 132:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Gallus gallus''   
''Gallus gallus''   
Line 126: Line 141:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Homo sapiens''   
''Homo sapiens''   
Line 140: Line 155:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Macaca mulatta''   
''Macaca mulatta''   
Line 150: Line 165:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Monodelphis domestica''   
''Monodelphis domestica''   
Line 159: Line 174:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Mus musculus''   
''Mus musculus''   
Line 168: Line 183:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Pan troglodytes''   
''Pan troglodytes''   
Line 179: Line 194:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Rattus norvegicus''   
''Rattus norvegicus''   
Line 188: Line 203:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
Line 195: Line 210:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
Line 202: Line 217:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Takifugu rubripes''   
''Takifugu rubripes''   
Line 214: Line 229:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
Line 228: Line 243:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Xenopus tropicalis''   
''Xenopus tropicalis''   
Line 238: Line 253:
|
|
From Inparanoid:20070104  
From Inparanoid:20070104  
|-
|-  
|
|
''Shigella flexneri''   
''Shigella flexneri''   
Line 245: Line 260:
|
|
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..W46a092e2b6ff7&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|
''E. coli'' O157
|
GLPF
|
From ECOO157CYC
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51823.C46ac0fd9893e2&page=51823&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..W46a092e2b6ff7-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.C46ac0fd9893e2-->
{{Evolution_homologs_table_help}}
 


===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_418362&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_418362&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


Line 262: Line 285:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..O46a092f425602-->
{{BacktoTop}}
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.S46ac100633d79-->
{|class = 'sortable' {{Prettytable}} id='92896'
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_accessions_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S46ac100633d79"  class=" tableEdit Gene_accessions_table" 
|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-
|-  
|
|
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
|
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00230 PFAM:PF00230]
[http://pfam.janelia.org/family/PF00230 PF00230 Major intrinsic protein]
|
|
   
   
|-class='sortbottom'
|-  
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..O46a092f425602&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
|
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19139:SF69 PTHR19139:SF69]
|
|-
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=81338 SUPERFAMILY:81338]
|
|-
|
[[EcoCyc]]
|
EcoCyc:EG10396
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG10396
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120000389
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB0391
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0012828
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51823.S46ac100633d79&page=51823&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..O46a092f425602-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.S46ac100633d79-->
{{Evolution_families_table_help}}
 
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
===Notes===
===Notes===
Line 284: Line 363:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.Z46a84bc5156cb-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Z46a84bc5156cb"  class=" tableEdit Links_table" 
|- {{table_heading_style}}
!|Name!!URL!!Comments
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51823.Z46a84bc5156cb&page=51823&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51823.Z46a84bc5156cb-->
 
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Anopheles gambiae ]][[Category:Genes with homologs in Arabidopsis thaliana ]][[Category:Genes with homologs in Bos taurus ]][[Category:Genes with homologs in Caenorhabditis briggsae ]][[Category:Genes with homologs in Caenorhabditis elegans ]][[Category:Genes with homologs in Canis familiaris ]][[Category:Genes with homologs in Ciona intestinalis ]][[Category:Genes with homologs in Danio rerio ]][[Category:Genes with homologs in Dictyostelium discoideum ]][[Category:Genes with homologs in Drosophila melanogaster ]][[Category:Genes with homologs in Drosophila pseudoobscura ]][[Category:Genes with homologs in Gallus gallus ]][[Category:Genes with homologs in Homo sapiens ]][[Category:Genes with homologs in Macaca mulatta ]][[Category:Genes with homologs in Monodelphis domestica ]][[Category:Genes with homologs in Mus musculus ]][[Category:Genes with homologs in Pan troglodytes ]][[Category:Genes with homologs in Rattus norvegicus ]][[Category:Genes with homologs in Saccharomyces cerevisiae ]][[Category:Genes with homologs in Schizosaccharomyces pombe ]][[Category:Genes with homologs in Takifugu rubripes ]][[Category:Genes with homologs in Tetraodon nigroviridis ]][[Category:Genes with homologs in Xenopus tropicalis ]][[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Anopheles gambiae ]]
[[Category:Genes with homologs in Arabidopsis thaliana ]]
[[Category:Genes with homologs in Bos taurus ]]
[[Category:Genes with homologs in Caenorhabditis briggsae ]]
[[Category:Genes with homologs in Caenorhabditis elegans ]]
[[Category:Genes with homologs in Canis familiaris ]]
[[Category:Genes with homologs in Ciona intestinalis ]]
[[Category:Genes with homologs in Danio rerio ]]
[[Category:Genes with homologs in Dictyostelium discoideum ]]
[[Category:Genes with homologs in Drosophila melanogaster ]]
[[Category:Genes with homologs in Drosophila pseudoobscura ]]
[[Category:Genes with homologs in Gallus gallus ]]
[[Category:Genes with homologs in Homo sapiens ]]
[[Category:Genes with homologs in Macaca mulatta ]]
[[Category:Genes with homologs in Monodelphis domestica ]]
[[Category:Genes with homologs in Mus musculus ]]
[[Category:Genes with homologs in Pan troglodytes ]]
[[Category:Genes with homologs in Rattus norvegicus ]]
[[Category:Genes with homologs in Saccharomyces cerevisiae ]]
[[Category:Genes with homologs in Schizosaccharomyces pombe ]]
[[Category:Genes with homologs in Takifugu rubripes ]]
[[Category:Genes with homologs in Tetraodon nigroviridis ]]
[[Category:Genes with homologs in Xenopus tropicalis ]]
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 08:37, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023960 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G06100 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000017894 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000006790 (score: 0.154)
  • ENSBTAP00000011196 (score: 0.074)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00034718 (score: 1.000; bootstrap: 100%)
  • WBGene00033933 (score: 0.247)
  • WBGene00024232 (score: 0.236)
  • WBGene00028320 (score: 0.174)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00000175 (score: 1.000; bootstrap: 100%)
  • WBGene00000169 (score: 0.274)
  • WBGene00000170 (score: 0.225)
  • WBGene00000171 (score: 0.186)
  • WBGene00000176 (score: 0.103)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000024352 (score: 1.000; bootstrap: 99%)
  • ENSCAFP00000025344 (score: 0.270)
  • ENSCAFP00000002706 (score: 0.155)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000019491 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2826 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-3773 (score: 1.000; bootstrap: 98%)
  • ZDB-GENE-040724-66 (score: 0.504)
  • ZDB-CDNA-040425-1559 (score: 0.217)
  • ZDB-GENE-030131-6461 (score: 0.217)
  • ZDB-CDNA-050809-21 (score: 0.206)
  • ZDB-GENE-050809-119 (score: 0.206)
  • ZDB-CDNA-040718-53 (score: 0.173)
  • ZDB-GENE-040718-40 (score: 0.173)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191271 (score: 1.000; bootstrap: 100%)
  • DDB0214915 (score: 0.261)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0034885 (score: 1.000; bootstrap: 100%)
  • FBgn0034883 (score: 0.423)
  • FBgn0034884 (score: 0.346)
  • FBgn0034882 (score: 0.103)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17871-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000006765 (score: 1.000; bootstrap: 97%)
  • ENSGALP00000003857 (score: 0.233)
  • ENSGALP00000003859 (score: 0.062)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000219919 (score: 1.000; bootstrap: 100%)
  • ENSP00000318355 (score: 0.251)
  • ENSP00000297991 (score: 0.246)
  • ENSP00000297988 (score: 0.150)
  • ENSP00000329634 (score: 0.113)
  • ENSP00000316510 (score: 0.113)
  • ENSP00000335588 (score: 0.108)
  • ENSP00000323912 (score: 0.098)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000014712 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000030755 (score: 0.261)
  • ENSMMUP00000004419 (score: 0.216)
  • ENSMMUP00000002063 (score: 0.173)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004690 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000010777 (score: 0.209)
  • ENSMODP00000021447 (score: 0.172)

From Inparanoid:20070104

Mus musculus

  • MGI:1333777 (score: 1.000; bootstrap: 99%)
  • MGI:1891066 (score: 0.239)
  • MGI:1314647 (score: 0.161)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000035672 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000035881 (score: 0.158)
  • ENSPTRP00000012166 (score: 0.146)
  • ENSPTRP00000035670 (score: 0.122)
  • ENSPTRP00000044066 (score: 0.122)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000013803 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000021442 (score: 0.240)
  • ENSRNOP00000012974 (score: 0.170)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YFL054C (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC9777 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000142951 (score: 1.000; bootstrap: 98%)
  • NEWSINFRUP00000154197 (score: 1.000; bootstrap: 98%)
  • NEWSINFRUP00000129418 (score: 0.549)
  • NEWSINFRUP00000160942 (score: 0.212)
  • NEWSINFRUP00000151009 (score: 0.198)
  • NEWSINFRUP00000157434 (score: 0.198)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017719001 (score: 1.000; bootstrap: 98%)
  • GSTENP00025612001 (score: 0.540)
  • GSTENP00020170001 (score: 0.261)
  • GSTENP00032599001 (score: 0.223)
  • GSTENP00006092001 (score: 0.192)
  • GSTENP00033973001 (score: 0.185)
  • GSTENP00000675001 (score: 0.137)
  • GSTENP00033974001 (score: 0.098)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000035583 (score: 1.000; bootstrap: 98%)
  • ENSXETP00000049658 (score: 0.196)
  • ENSXETP00000023755 (score: 0.193)
  • ENSXETP00000004581 (score: 0.114)

From Inparanoid:20070104

Shigella flexneri

GLPF

From SHIGELLACYC

E. coli O157

GLPF

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00230 Major intrinsic protein

Panther (EcoliWiki Page)

PTHR19139:SF69

Superfamily (EcoliWiki Page)

SUPERFAMILY:81338

EcoCyc

EcoCyc:EG10396

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10396

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000389

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0391

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012828

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=glpF:Evolution&oldid=1391883"