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{{Tab On|Quickview|focA}}{{Tab|Gene|focA}}{{Tab|Gene Product(s)|focA}}{{Tab|Expression|focA}}{{Tab|Evolution|focA}}{{Tab|On One Page|focA}}{{TabsBottom}}
{{Tab On|Quickview|focA}}{{Tab|Gene|focA}}{{Tab|Gene Product(s)|focA}}{{Tab|Expression|focA}}{{Tab|Evolution|focA}}{{Tab|On One Page|focA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[focA:Gene|''focA]]'' (synonyms: ''ECK0895, b0904, JW0887, ycaE'')<ref name='LIB:Riley_2006'/>
''focA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[focA:Gene_Product(s)|FocA product]]<ref name='LIB:Riley_2006'/>: formate transporter<ref name='LIB:Riley_2006'/>, B0904<ref name='LIB:EcoCyc10.6'/>, YcaE<ref name='LIB:EcoCyc10.6'/>, FocA<ref name='LIB:EcoCyc10.6'/>
''ECK0895, b0904, JW0887, ycaE''<ref name='LIB:Riley_2006'/>, ycaE''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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FocA formate FNT transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
FocA formate FNT transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Probable bidirectional formate transporter 1; mutants are hypophosphite resistance and have elevated intracellular formate and reduced excreted formate<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''formate transporter<ref name='LIB:Riley_2006'/>, B0904<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FocA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0895, JW0887, ycaE, b0904''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:focA-pflB|focA-pflB]]<ref name='LIB:EcoCyc10.6'/>, pfl  
transcription unit(s): [[:Category:Txn_unit:focA-pflB|focA-pflB]]<ref name='LIB:EcoCyc10.6'/>, pfl  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=focA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11258]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001233&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=focA&loc=MG1655%3A953689..952832,W3110%3A954888..954031,DH10B%3A1007617..1006760,REL606%3A971559..970702,BW2952%3A855800..856657]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=855800&end=856657&gene=focA&aa=mkadnpfdlllpaamakvaeeagvykatkhplktfylaitagvfisiafvfyitattgtgtmpfgmaklvggicfslglilcvvcgadlftstvlivvakasgritwgqlaknwlnvyfgnlvgallfvllmwlsgeymtangqwglnvlqtadhkvhhtfieavclgilanlmvclavwmsysgrslmdkafimvlpvamfvasgfehsianmfmipmgivirdfaspefwtavgsapenfshltvmnfitdnlipvtigniigggllvgltywviylrendhh]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=focA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=focA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
FocA is a membrane protein with six TM regions.  GUG start codon confirmed by mutagenesis.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

focA

Gene Synonym(s)

ECK0895, b0904, JW0887, ycaE[1], ycaE

Product Desc.

FocA formate FNT transporter[2][3]

Probable bidirectional formate transporter 1; mutants are hypophosphite resistance and have elevated intracellular formate and reduced excreted formate[4]

Product Synonyms(s)

formate transporter[1], B0904[2][1], YcaE[2][1], FocA[2][1] , ECK0895, JW0887, ycaE, b0904

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): focA-pflB[2], pfl

Regulation/Activity
Quick Links



        

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Notes

[back to top]


FocA is a membrane protein with six TM regions. GUG start codon confirmed by mutagenesis.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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