cydD:Quickview: Difference between revisions

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{{Tab On|Quickview|cydD}}{{Tab|Gene|cydD}}{{Tab|Gene Product(s)|cydD}}{{Tab|Expression|cydD}}{{Tab|Evolution|cydD}}{{Tab|On One Page|cydD}}{{TabsBottom}}
{{Tab On|Quickview|cydD}}{{Tab|Gene|cydD}}{{Tab|Gene Product(s)|cydD}}{{Tab|Expression|cydD}}{{Tab|Evolution|cydD}}{{Tab|On One Page|cydD}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[cydD:Gene|''cydD]]'' (synonyms: ''ECK0878, b0887, JW0870, htrD'')<ref name='LIB:Riley_2006'/>
''cydD''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[cydD:Gene_Product(s)|CydD product]]<ref name='LIB:Riley_2006'/>: fused cysteine transporter subunits of ABC superfamily: membrane component<ref name='LIB:Riley_2006'/>, ATP-binding component<ref name='LIB:Riley_2006'/>, B0887<ref name='LIB:EcoCyc10.6'/>, HtrD<ref name='LIB:EcoCyc10.6'/>, CydD<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:cydDC glutathione ABC transporter|cydDC glutathione ABC transporter]]<ref name='LIB:EcoCyc10.6'/>
''ECK0878, b0887, JW0870, htrD''<ref name='LIB:Riley_2006'/>, htrD''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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CydD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
CydD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:cydDC glutathione ABC transporter|cydDC glutathione ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Cysteine exporter CydDC; ABC transporter exports cysteine to periplasm as required for cytochrome assembly; N-terminal permease domain and C-terminal cytoplasmic ATP-binding domain<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''fused cysteine transporter subunits of ABC superfamily: membrane component<ref name='LIB:Riley_2006'/>, ATP-binding component<ref name='LIB:Riley_2006'/>, B0887<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CydD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0878, htrD, JW0870, b0887''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:cydDC|cydDC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cydDC|cydDC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cydD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11405]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001371&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cydD&loc=MG1655%3A930185..928419,W3110%3A931384..929618,DH10B%3A984113..982347,REL606%3A948020..946254,BW2952%3A831387..833153]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=831387&end=833153&gene=cydD&aa=mnksrqkeltrwlkqqsvisqrwlnisrllgfvsgiliiaqawfmarilqhmimeniprealllpftllvltfvlrawvvwlrervgyhagqhirfairrqvldrlqqagpawiqgkpagswatlvleqiddmhdyyarylpqmalavsvpllivvaifpsnwaaalillgtapliplfmalvgmgaadanrrnflalarlsghfldrlrgmetlrifgrgeaeiesirsasedfrqrtmevlrlaflssgilefftslsialvavyfgfsylgeldfghydtgvtlaagflalilapeffqplrdlgtfyhakaqavgaadslktfmetplahpqrgeaelastdpvtieaeelfitspegktlagplnftlpagqravlvgrsgsgkssllnalsgflsyqgslringielrdlspeswrkhlswvgqnpqlpaatlrdnvllarpdaseqelqaaldnawvseflpllpqgvdtpvgdqaarlsvgqaqrvavarallnpcslllldepaasldahseqrvmealnaaslrqttlmvthqledladwdviwvmqdgriieqgryaelsvaggpfatllahrqeei]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cydD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cydD]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Translation start site verified by start codon mutagenesis (Cruz-Ramos, 2004).<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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<references/>
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cydD

Gene Synonym(s)

ECK0878, b0887, JW0870, htrD[1], htrD

Product Desc.

CydD[2][3];

Component of cydDC glutathione ABC transporter[2][3]

Cysteine exporter CydDC; ABC transporter exports cysteine to periplasm as required for cytochrome assembly; N-terminal permease domain and C-terminal cytoplasmic ATP-binding domain[4]

Product Synonyms(s)

fused cysteine transporter subunits of ABC superfamily: membrane component[1], ATP-binding component[1], B0887[2][1], HtrD[2][1], CydD[2][1] , ECK0878, htrD, JW0870, b0887

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cydDC[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Translation start site verified by start codon mutagenesis (Cruz-Ramos, 2004).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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