yhaO:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yhaO''  
''yhaO''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3100, b3110, JW5519''<ref name='LIB:Riley_2006'/>
''ECK3100, b3110, JW5519''<ref name='LIB:Riley_2006'/>, JW5519''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted transporter<ref name='LIB:Riley_2006'/>, B3110<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhaO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted transporter<ref name='LIB:Riley_2006'/>, B3110<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhaO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3100, JW5519, b3110''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yhaO&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12754]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002378&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yhaO&loc=MG1655%3A3255969..3254701,W3110%3A3256603..3255335,REL606%3A3190980..3189712,DH10B%3A3353714..3352446,BW2952%3A3141849..3143180]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3141849&end=3143180&gene=yhaO&aa=meiasnkgviadastpagragmsesewreaikfdstdtgwvimsigmaigagivflpvqvglmglwvfllssvigypamylfqrlfintlaespeckdypsvisgylgknwgillgalyfvmlviwmfvystaitndsasylhtfgvtegllsdspfyglvlicilvaissrgekllfkistgmvltkllvvaalgvsmvgmwhlynvgslpplgllvknaiitlpftltsilfiqtlspmvisyrsreksievarhkalramniafgilfvtvffyavsftlamghdeavkayeqnisalaiaaqfisgdgaawvkvvsvilnifavmtaffgvylgfreatqgivmnilrrkmpaekinenlvqrgimifaillawsaivlnapvlsftsicspifgmvgclipawlvykvpalhkykgmslyliivtglllcvspflafs]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhaO+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yhaO]]&nbsp;&nbsp;


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HAAAP family. Upregulated by GSNO in defined medium.<ref name='LIB:EcoGene'/>
Notes from [http://ecogene.org/gene/EG12754/reference EcoGene]


YhaO is a member of the Hydroxy/Aromatic Amino Acid Permease [http://www.tcdb.org/search/result.php?tc=2.A.42 (HAAAP) family.]


Transcription is upregulated by S-nitrosoglutathione in defined medium.<ref name='PMID:15647275'/>
Translation of the yhaO mRNA is activated the FNR-regulated FnrS sRNA.<ref name='PMID:20075074'/>


<noinclude>
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==References==
==References==
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Latest revision as of 22:16, 18 April 2018

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yhaO

Gene Synonym(s)

ECK3100, b3110, JW5519[1], JW5519

Product Desc.

YhaO STP transporter[2][3]

Putative amino acid:H+ symport permease, function unknown[4]

Product Synonyms(s)

predicted transporter[1], B3110[2][1], YhaO[2][1] , ECK3100, JW5519, b3110

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yhaM[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Notes from EcoGene

YhaO is a member of the Hydroxy/Aromatic Amino Acid Permease (HAAAP) family.

Transcription is upregulated by S-nitrosoglutathione in defined medium.[5]

Translation of the yhaO mRNA is activated the FNR-regulated FnrS sRNA.[6]


References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Flatley, J et al. (2005) Transcriptional responses of Escherichia coli to S-nitrosoglutathione under defined chemostat conditions reveal major changes in methionine biosynthesis. J. Biol. Chem. 280 10065-72 PubMed
  6. ↑ Boysen, A et al. (2010) Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli. J. Biol. Chem. 285 10690-702 PubMed
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