yghJ:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yghJ''  
''yghJ''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted inner membrane lipoprotein<ref name='LIB:Riley_2006'/>, B4466<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YghJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted inner membrane lipoprotein<ref name='LIB:Riley_2006'/>, B4466<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YghJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , acfD, ECK2968, JW5925, b4466''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yghJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7541]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004101&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yghJ&loc=MG1655%3A3117134..3112572,W3110%3A3117768..3113206,REL606%3A3046003..3041450,BW2952%3A2999720..3004282]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2999720&end=3004282&gene=yghJ&aa=mnkkfkykksllaailsatllagcdgggsgsssdtppvdsgtgslpevkpdptpnpeptpeptpdpeptpepipdpeptpepepepvptktgyltlggsqrvtgatcngessdgftfkpgedvtcvagnttiatfntqseaarslravekvsfsledaqelagsddkksnavslvtssnscpanteqvcltfssvieskrfdslykqidlapeefkklvneevennaatdkapsthtspvvpvttpgtkpdlnasfvsanaeqfyqyqpteiilsegrlvdsqgygvagvnyytnsgrgvtgengefsfswgetisfgidtfelgsvrgnkstialtelgdevrganidqlihrysttgqnntrvvpddvrkvfaeypnvineiinlslsngatlgegeqvvnlpnefieqfntgqakeidtaicaktdgcnearwfslttrnvndgqiqgvinklwgvdtnyksvskfhvfhdstnfygstgnargqavvnisnaafpilmarndknywlafgekrawdknelayiteapslvepenvtrdtatfnlpfislgqvgegklmvignphynsilrcpngyswnggvnkdgqctlnsdpddmknfmenvlrylsddkwkpdakasmtvgtnldtvyfkrhgqvtgnsaafdfhpdfagisvehlssygdldpqempllilngfeyvtqvgndpyaiplradtskpkltqqdvtdliaylnkggsvlimenvmsnlkeesasgfvrlldaaglsmalnksvvnndpqgypnrvrqqratgiwvyerypavdgalpytidsktgevkwkyqvenkpddkpklevaswledvdgkqetryafideadhktedslkaakekifaafpglkectnpayhyevncleyrpgtgvpvtggmyvpqytqlslnadtakamvqaadlgtniqrlyqhelyfrtngrkgerlssvdlerlyqnmsvwlwndtsyryeegkndelgfktfteflncyandayaggtkcsadlkkslvdnnmiygdgsskagmmnpsyplnymekpltrlmlgrswwdlnikvdvekypgavseegqnvtetislysnptkwfagnmqstglwapaqkevtiksnanvpvtvtvaladdltgrekhevalnrpprvtktysldasgtvkfkvpyggliyikgnsstnesasftftgvvkapfykdgawkndlnspaplgelesdafvyttpkknlnasnytggleqfandldtfassmndfygrdsedgkhrmftyknlpghkhrftndvqisigdahsgypvmnssfspnsttlpttplndwliwhevghnaaetpltvpgatevannvlalymqdrylgkmnrvadditvapeyleesnnqawarggagdrllmyaqlkewaeknfdikkwypdgtplpefyseregmkgwnlfqlmhrkargdevsndkfggknycaesngnaadtlmlcaswvaqtdlseffkkwnpganayqlpgasemsfeggvsqsayntlasldlpkpeqgpetinqvtehkmsae]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yghJ+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yghJ]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yghJ

Gene Synonym(s)

ECK2968, b4466, JW5925, acfD, b2974 (obsolete), b2973 (obsolete)[1][2]

Product Desc.

predicted inner membrane lipoprotein[2][3]

Large probable lipoprotein, function unknown; Cys conserved[4]

Product Synonyms(s)

predicted inner membrane lipoprotein[1], B4466[2][1], YghJ[2][1] , acfD, ECK2968, JW5925, b4466

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yghJ[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YghJ is homologous to V. cholerae accessory colonization factor AcfD. First 23 aa are predicted to be a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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