yggG:Quickview: Difference between revisions

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Latest revision as of 21:41, 27 May 2013

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Quickview

Standard Name	yggG
Gene Synonym(s)	ECK2931, b2936, JW2903^[1], JW2903
Product Desc.	predicted peptidase^[2]^[3] Heat shock protein binds Era; putative metalloprotease lipoprotein; Cys in lipobox conserved; M48 family^[4]
Product Synonyms(s)	predicted peptidase^[1], B2936^[2]^[1], YggG^[2]^[1] , ECK2931, JW2903, b2936
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): yggG^[2]
Regulation/Activity
Quick Links
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Notes

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The heat shock protein YggG binds Era and mitigates the deleterious effect of overproducing mutant Era-1 protein (Huang, 2007). htpX, yggG, yfgC and ycaL are paralogs. Gene disruption does not cause growth defect (unpublished data, Y. Akiyama, cited in Sakoh, 2005). First 18 aa are predicted to be a type II signal peptide.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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@@ Line 23: / Line 23: @@
 *   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
-****************************************************************************************** -->{{Quickview_table_help}}
+****************************************************************************************** -->
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 !align=left {{table_heading_style}} |Standard Name
+||
+''yggG''
 |-
 !align=left {{table_heading_style}} |Gene Synonym(s)
+||
+''ECK2931, b2936, JW2903''<ref name='LIB:Riley_2006'/>, JW2903''
 |-
 !align=left {{table_heading_style}} |Product Desc.
+||
+predicted peptidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Heat shock protein binds Era; putative metalloprotease lipoprotein; Cys in lipobox conserved; M48 family<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''predicted peptidase<ref name='LIB:Riley_2006'/>, B2936<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2931, JW2903, b2936''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
 !align=left {{table_heading_style}} |Knock-Out Phenotype
+||
 |-
 !align=left {{table_heading_style}} |Regulation/Expression
+||
+transcription unit(s): [[:Category:Txn_unit:yggG|yggG]]<ref name='LIB:EcoCyc10.6'/>
 |-
 !align=left {{table_heading_style}} |Regulation/Activity
+||
+|-
+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yggG&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yggG&loc=MG1655%3A3079935..3080693,W3110%3A3080569..3081327,REL606%3A2967664..2968422,DH10B%3A3175004..3175762,BW2952%3A2967083..2967841]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2967083&end=2967841&gene=yggG&aa=mlaccaiyspvrcafpyteterrftckrrifriiltlcgrenmkirallvamsvatvltgcqnmdsngllssgaeafqayslsdaqvktlsdqacqemdskatiapanseyakrlttianalgnningqpvnykvymakdvnafamangcirvysglmdmmtdneveavighemghvalghvkkgmqvalgtnavrvaaasaggivgslsqsqlgnlgeklvnsqfsqrqeaeaddysydllrqrgispaglatsfeklakleegrqssmfddhpasaeraqhirdrmsadgik]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yggG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yggG]]&nbsp;&nbsp;
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yggG:Quickview: Difference between revisions

Latest revision as of 21:41, 27 May 2013

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