ydfG:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ydfG''  
''ydfG''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1532, b1539, JW1532''<ref name='LIB:Riley_2006'/>
''ECK1532, b1539, JW1532''<ref name='LIB:Riley_2006'/>, JW1532''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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L-allo-threonine dehydrogenase, NAD(P)-binding<ref name='LIB:Riley_2006'/>, B1539<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''L-allo-threonine dehydrogenase, NAD(P)-binding<ref name='LIB:Riley_2006'/>, B1539<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1532, JW1532, b1539''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydfG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12345]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002220&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydfG&loc=MG1655%3A1625541..1626287,W3110%3A1629231..1629977,DH10B%3A1715166..1715912,REL606%3A1595283..1596029,BW2952%3A1517600..1518346]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1517600&end=1518346&gene=ydfG&aa=mivlvtgatagfgecitrrfiqqghkviatgrrqerlqelkdelgdnlyiaqldvrnraaieemlaslpaewcnidilvnnaglalgmepahkasvedwetmidtnnkglvymtravlpgmvernhghiinigstagswpyaggnvygatkafvrqfslnlrtdlhgtavrvtdiepglvggtefsnvrfkgddgkaektyqntvaltpedvseavwwvstlpahvnintlemmpvtqsyaglnvhrq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydfG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydfG]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ydfG

Gene Synonym(s)

ECK1532, b1539, JW1532[1], JW1532

Product Desc.

3-hydroxy acid dehydrogenase[2][3];

Component of 3-hydroxy acid dehydrogenase[3]

L-allo-threonine dehydrogenase, NADP+-dependent; other substrates include L-serine, D-serine, D-threonine and 3-hydroxyisobutyrate[4]

Product Synonyms(s)

L-allo-threonine dehydrogenase, NAD(P)-binding[1], B1539[2][1], YdfG[2][1] , ECK1532, JW1532, b1539

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydfG[2]

Regulation/Activity
Quick Links



        

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Notes

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The product of the oxidation of the 3-hydroxyl group of L-allo-threonine is aminoacetone, via spontaneous decarboxylation of the primary reaction product L-2-amino-3-ketobutyrate. Downregulated by beryllium.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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