ybhR:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
No edit summary
touch
 
(10 intermediate revisions by 2 users not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="U49b02ac54d92f" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
''ybhR''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK0781, b0792, JW5803''<ref name='LIB:Riley_2006'/>, JW5803''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
YbhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
Component of [[:Category:Complex:YbhF/YbhR/YbhS ABC transporter|YbhF/YbhR/YbhS ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Putative ABC-type transporter, function unknown<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''predicted transporter subunit: membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0792<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0781, JW5803, b0792''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ybhR|ybhR]]<ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybhR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6409]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003009&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybhR&loc=MG1655%3A825331..824225,W3110%3A826530..825424,DH10B%3A879259..878153,REL606%3A818733..817627,BW2952%3A727193..728299]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=727193&end=728299&gene=ybhR&aa=mfhrlwtlirkelqsllrepqtraililpvliqvilfpfaatlevtnatiaiydedngehsveltqrfarasafthvlllkspqeirptidtqkalllvrfpadfsrkldtfqtaplqlildgrnsnsaqiaanylqqivknyqqellegkpkpnnselvvrnwynpnldykwfvvpsliamittigvmivtslsvarereqgtldqllvsplttwqifigkavpalivatfqativlaigiwayqipfagslalfyftmviyglslvgfgllisslcstqqqafigvfvfmmpaillsgyvspvenmpvwlqnltwinpirhftditkqiylkdasldivwnslwpllvitattgsaayamfrrkvm]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybhR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybhR]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.3325.U49b02ac54d92f&page=3325&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.3325.U49b02ac54d92f&page=3325&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3325.U49b02ac54d92f--></protect>
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3325.U49b02ac54d92f--></protect>

Latest revision as of 21:44, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybhR

Gene Synonym(s)

ECK0781, b0792, JW5803[1], JW5803

Product Desc.

YbhR[2][3];

Component of YbhF/YbhR/YbhS ABC transporter[2][3]

Putative ABC-type transporter, function unknown[4]

Product Synonyms(s)

predicted transporter subunit: membrane component of ABC superfamily[1], B0792[2][1], YbhR[2][1] , ECK0781, JW5803, b0792

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybhR[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The putative ybiHybhGFSR operon encodes the YbhG putative membrane fusion protein of efflux pumps. ybhR is paralogous to ybhS, yhhJ, and rbbA.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ybhR:Quickview&oldid=1395431"