rimN:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|   id="L49b022c22b4e1" class=" tableEdit New_Quickview_Table"


|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rimN''  
''rimN''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yrdC, ECK3269, b3282, JW3243''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yrdC, ECK3269, b3282, JW3243''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW3243''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted ribosome maturation factor<ref name='LIB:Riley_2006'/>, B3282<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrdC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RimN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted ribosome maturation factor<ref name='LIB:Riley_2006'/>, B3282<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrdC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RimN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3269, JW3243, yrdC, b3282''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rimN&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rimN&loc=MG1655%3A3429437..3428865,W3110%3A4209001..4209573,BW2952%3A3316022..3316594]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3316022&end=3316594&gene=rimN&aa=mnnnlqrdaiaaaidvlneerviaypteavfgvgcdpdsetavmrllelkqrpvdkgliliaanyeqlkpyiddtmltdvqretifsrwpgpvtfvfpapattprwltgrfdslavrvtdhplvvalcqaygkplvstsanlsglppcrtvdevraqfgaafpvvpgetggrlnpseirdaltgelfrqg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rimN+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rimN]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rimN

Gene Synonym(s)

yrdC, ECK3269, b3282, JW3243[1][2], JW3243

Product Desc.

dsRNA-binding protein, putative ribosome maturation factor[2][3]

Factor required for 16S RNA processing; binds dsRNA; deletion suppresses a prfA mutation; low abundance protein[4]

Product Synonyms(s)

predicted ribosome maturation factor[1], B3282[2][1], YrdC[2][1], RimN[2][1] , ECK3269, JW3243, yrdC, b3282

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yrdD-rimN-aroE-yrdB[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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rimM is an hypF and yciO paralog.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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