prpD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''prpD''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0331, b0334, JW0325, acnC, yahT''<ref name='LIB:Riley_2006'/>, yahT''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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G6199<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
2-Methylcitrate dehydratase, 2-methylisocitrate hydratase; propionate catabolism via 2-methlycitrate cycle; active on citrate and isocitrate; responsible for residual apparent aconitase activity in acnAB double mutant; monomeric iron-sulfur protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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''2-methylcitrate dehydratase<ref name='LIB:Riley_2006'/>, B0334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcnC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YahT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , acnC, ECK0331, JW0325, yahT, b0334''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:prpB|prpB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:prpBCDE|prpBCDE]]<ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=prpD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6199]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002816&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=prpD&loc=MG1655%3A350439..351890,W3110%3A350439..351890,REL606%3A323865..325316]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=323865&end=325316&gene=prpD&aa=msaqinnirpefdreivdivdyvmnyeisskvaydtahyclldtlgcglealeypackkllgpivpgtvvpngvrvpgtqfqldpvqaafnigamirwldfndtwlaaewghpsdnlggilatadwlsrnavasgkapltmkqvltamikaheiqgcialensfnrvgldhvllvkvastavvaemlgltreeilnavslawvdgqslrtyrhapntgtrkswaagdatsravrlalmaktgemgypsaltapvwgfydvsfkgesfrfqrpygsyvmenvlfkisfpaefhsqtaveaamtlyeqmqaagktaadiekvtirtheaciriidkkgplnnpadrdhciqymvaipllfgrltaadyednvaqdkridalrekincfedpaftadyhdpekraianaitleftdgtrfeevvveypigharrrqdgipklvdkfkinlarqfptrqqqrilevsldrarleqmpvneyldlyvi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=prpD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=prpD]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

prpD

Gene Synonym(s)

ECK0331, b0334, JW0325, acnC, yahT[1], yahT

Product Desc.

G6199[2][3]

2-Methylcitrate dehydratase, 2-methylisocitrate hydratase; propionate catabolism via 2-methlycitrate cycle; active on citrate and isocitrate; responsible for residual apparent aconitase activity in acnAB double mutant; monomeric iron-sulfur protein[4]

Product Synonyms(s)

2-methylcitrate dehydratase[1], B0334[2][1], AcnC[2][1], YahT[2][1], PrpD[2][1] , acnC, ECK0331, JW0325, yahT, b0334

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): prpB[2], prpBCDE[2]

Regulation/Activity
Quick Links



        

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Notes

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Crp regulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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