oxc:Quickview: Difference between revisions
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{| | {| id="H49aeeef3c9e63" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
|| | |||
''oxc'' | |||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2369, b2373, JW2370, yfdU''<ref name='LIB:Riley_2006'/>, yfdU'' | |||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted oxalyl-CoA decarboxylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | |||
Probable oxalyl-CoA decarboxylase, oxalate catabolism<ref name='LIB:EcoGene'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''predicted oxalyl-CoA decarboxylase<ref name='LIB:Riley_2006'/>, B2373<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfdU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Oxc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2369, JW2370, yfdU, b2373'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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|- | |- | ||
!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:oxc|oxc]]<ref name='LIB:EcoCyc10.6'/> | |||
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=oxc&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7236]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003811&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=oxc&loc=MG1655%3A2489972..2488278,W3110%3A2497396..2495702,DH10B%3A2581737..2580043,BW2952%3A2374083..2375777]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2374083&end=2375777&gene=oxc&aa=msdqlqmtdgmhiivealkqnnidtiygvvgipvtdmarhaqaegiryigfrheqsagyaaaasgfltqkpgicltvsapgflngltalanatvngfpmimisgssdraivdlqqgdyeeldqmnaakpyakaafrvnqpqdlgialarairvsvsgrpggvyldlpanvlaatmekdealttivkvenpspallpcpksvtsaisllakaerpliilgkgaaysqadeqlrefiesaqipflpmsmakgiledthplsaaaarsfalanadvvmlvgarlnwllahgkkgwaadtqfiqldiepqeidsnrpiavpvvgdiassmqgmlaelkqntfttplvwrdilnihkqqnaqkmheklstdtqplnyfnalsavrdvlrenqdiylvnegantldnarniidmykprrrldcgtwgvmgigmgyaigasvtsgspvvaiegdsafgfsgmeieticrynlpvtivifnnggiyrgdgvdlsgagapsptdllhharydklmdafrgvgynvtttdelrhalttgiqsrkptiinvvidpaagtesghitklnpkqvagn]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=oxc+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=oxc]] | |||
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Latest revision as of 21:47, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
oxc |
|---|---|
| Gene Synonym(s) |
ECK2369, b2373, JW2370, yfdU[1], yfdU |
| Product Desc. |
predicted oxalyl-CoA decarboxylase[2][3] Probable oxalyl-CoA decarboxylase, oxalate catabolism[4] |
| Product Synonyms(s) |
predicted oxalyl-CoA decarboxylase[1], B2373[2][1], YfdU[2][1], Oxc[2][1] , ECK2369, JW2370, yfdU, b2373 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Orthologous to O. formigenes Oxc. EvgAS regulon. the frc-oxc-yfdVE operon is adjacent and convergent on evgAS. Uninduced level is probably low since Lung et al. found no activity in E. coli host cells. AFMB Structural Genomics target No. 73 (http://afmb.cnrs-mrs.fr/article171.html).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.