hspQ:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''hspQ''  
''hspQ''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yccV, ECK0957, b0966, JW5970''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yccV, ECK0957, b0966, JW5970''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW5970''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding protein, hemimethylated<ref name='LIB:Riley_2006'/>, B0966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HspQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding protein, hemimethylated<ref name='LIB:Riley_2006'/>, B0966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HspQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0957, JW5970, yccV, b0966''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hspQ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6500]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003100&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hspQ&loc=MG1655%3A1027944..1027627,W3110%3A1029143..1028826,DH10B%3A1081872..1081555,BW2952%3A930595..930912]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=930595&end=930912&gene=hspQ&aa=mwnftliskvkisrevtmiaskfgigqqvrhsllgylgvvvdidpvyslsepspdelavndelraapwyhvvmeddnglpvhtylaeaqlsselqdehpeqpsmdelaqtirkqlqaprlrn]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hspQ+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hspQ]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hspQ

Gene Synonym(s)

yccV, ECK0957, b0966, JW5970[1][2], JW5970

Product Desc.

heat shock protein, hemimethylated DNA-binding protein[2][3];

Component of heat shock protein, hemimethylated DNA-binding protein[3]

Heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein; mutation suppresses some dnaA(Ts)[4]

Product Synonyms(s)

DNA-binding protein, hemimethylated[1], B0966[2][1], YccV[2][1], HspQ[2][1] , ECK0957, JW5970, yccV, b0966

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yccV[2]

Regulation/Activity
Quick Links



        

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Notes

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A mutation in hspQ allows some dnaA(Ts) strains to grow at 40C, and slows the degradation of DnaA508 at 40C. Despite forcing translation at the upstream start, some HspQ(YccV) protein likely initiating at this true start site was observed by d'Alencon et al. (2003). Binding to hemimethylated oriC is specific, but weak, possibly due to the extra 17 N-terminal residues on the purified HspQ(YccV). RpoH regulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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