hofC:Quickview: Difference between revisions

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|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''hofC''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0105, b0106, JW0102, hopC, yacD''<ref name='LIB:Riley_2006'/>, yacD''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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protein transport protein HofC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Homologous to PilC of P. aeruginosa; function not established, insertion mutation gives no phenotype<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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''assembly protein in type IV pilin biogenesis, transmembrane protein<ref name='LIB:Riley_2006'/>, B0106<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HopC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HofC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0105, hopC, JW0102, yacD, b0106''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hofC|hofC]]<ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hofC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11798]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001732&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hofC&loc=MG1655%3A115724..114522,W3110%3A115724..114522,DH10B%3A89828..88626,REL606%3A118528..117326,BW2952%3A114521..115723]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=114521&end=115723&gene=hofC&aa=maskqlwrwhgitgdgnaqdgmlwaesrtlllmalqqqmvtplslkriainsaqwrgdksaevihqlatllkagltlseglallaeqhpskqwqallqslahdleqgiafsnallpwsevfpplyqamirtgeltgkldeccfelarqqkaqrqltdkvksalrypiiilamaimvvvamlhfvlpefaaiyktfntplpaltqgimtladfsgewswllvlfgfllaiankllmrrptwlivrqklllripimgslmrgqkltqiftilaltqsagitflqgvesvretmrcpywvqlltqiqhdisngqpiwlalkntgefsplclqlvrtgeasgsldlmldnlahhhrentmaladnlaallepalliitggiigtlvvamylpifhlgdamsgmg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hofC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hofC]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hofC

Gene Synonym(s)

ECK0105, b0106, JW0102, hopC, yacD[1], yacD

Product Desc.

protein transport protein HofC[2][3]

Homologous to PilC of P. aeruginosa; function not established, insertion mutation gives no phenotype[4]

Product Synonyms(s)

assembly protein in type IV pilin biogenesis, transmembrane protein[1], B0106[2][1], YacD[2][1], HopC[2][1], HofC[2][1] , ECK0105, hopC, JW0102, yacD, b0106

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hofC[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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